CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-par_contig_374-snap-gene-0.8
(
Pythium arrhenomanes
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
maker-par_contig_374-snap-gene-0.8
T015203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000016521
ARID/BRIGHT
2
68
LQSLPRTPKGASIDWVRLYEEVVAKGGFQFATRNKLWSAIASRECLNIDIMPYVLASFYERYLLAFE
Links
Other
ARID/BRIGHT
family TFs
Other
Pythium arrhenomanes
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG12337
Caenorhabditis briggsae
CBG12337
N
0.437
CBN07938
Caenorhabditis brenneri
CBN07938
N
0.437
CJA11729
Caenorhabditis japonica
CJA11729
N
0.505
CRE29533
Caenorhabditis remanei
CRE29533
N
0.437
DME_0001005001
Dracunculus medinensis
DME_0001005001
N
0.422
let-526
Caenorhabditis elegans
WBGene00002717
N
0.437
maker-pag1_scaffold_15-fgenesh-gene-1.10
Pythium aphanidermatum
maker-pag1_scaffold_15-fgenesh-gene-1.10
N
0.606
NV21537
Nasonia vitripennis
NV21537
N
0.438
Physo141839
Phytophthora sojae
Physo141839
N
0.437
PYU1_G013091
Pythium ultimum
PYU1_G013091
N
0.500