Sb10g024400 (Sorghum bicolor)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Sb10g024400 T015561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.724 0.824
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.629 0.753
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g024400.1 ARID/BRIGHT 165 250

Links

Other ARID/BRIGHT family TFs
Other Sorghum bicolor TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP26642 Atta cephalotes ACEP26642 N
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N
Bm1891 Brugia malayi Bm1891 N
BTMF_0001195401 Brugia timori BTMF_0001195401 N
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N
CBG12337 Caenorhabditis briggsae CBG12337 N
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N
CJA11729 Caenorhabditis japonica CJA11729 N
CRE29533 Caenorhabditis remanei CRE29533 N
DME_0001005001 Dracunculus medinensis DME_0001005001 N
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N
GB44899 Apis mellifera GB44899 N
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N
HCOI00324200 Haemonchus contortus HCOI00324200 N
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N
ISCW014189 Ixodes scapularis ISCW014189 I
L596_g4117 Steinernema carpocapsae L596_g4117 N
L889_g180 Steinernema feltiae L889_g180 N
L892_g19705 Steinernema scapterisci L892_g19705 N
L893_g29191 Steinernema glaseri L893_g29191 N
L898_g16017 Steinernema monticolum L898_g16017 N
L898_g7337 Steinernema monticolum L898_g7337 N
let-526 Caenorhabditis elegans WBGene00002717 N
maker-par_contig_374-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_374-snap-gene-0.8 N
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N
NECAME_01002 Necator americanus NECAME_01002 N
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N
PPA05721 Pristionchus pacificus PPA05721 N
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N
SINV22763 Solenopsis invicta SINV22763 N
SMAR006121 Strigamia maritima SMAR006121 I
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N
TCNE_0000128301 Toxocara canis TCNE_0000128301 N
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N
WBGene00237224 Onchocerca volvulus WBGene00237224 N
WUBG_00477 Wuchereria bancrofti WUBG_00477 N