Si017073m.g (Setaria italica)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Si017073m.g T015599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si017073m ARID/BRIGHT 182 267

Links

Other ARID/BRIGHT family TFs
Other Setaria italica TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003515 Calypte anna Aan_R003515 I
Afo_R013485 Aptenodytes forsteri Afo_R013485 I
Alligator_sinensis_CCG002668.1 Alligator sinensis Alligator_sinensis_CCG002668.1 I
Brh_R000146 Buceros rhinoceros Brh_R000146 I
ENSACAG00000012187 Anolis carolinensis ENSACAG00000012187 I
ENSAMEG00000004934 Ailuropoda melanoleuca ENSAMEG00000004934 I
ENSAPLG00000014618 Anas platyrhynchos ENSAPLG00000014618 I
ENSBTAP00000017410-D1 Bos grunniens ENSBTAP00000017410-D1 I
ENSCSAG00000007275 Chlorocebus sabaeus ENSCSAG00000007275 I
ENSFALG00000006460 Ficedula albicollis ENSFALG00000006460 I
ENSGALG00000003654 Gallus gallus ENSGALG00000003654 I
ENSMPUG00000014265 Mustela putorius furo ENSMPUG00000014265 I
ENSNLEG00000002304 Nomascus leucogenys ENSNLEG00000002304 I
ENSOANG00000014185 Ornithorhynchus anatinus ENSOANG00000014185 I
ENSOARG00000018638 Ovis aries ENSOARG00000018638 I
ENSP00000226247 Macaca fascicularis ENSP00000226247 I
ENSPANG00000023451 Papio anubis ENSPANG00000023451 I
ENSPPYG00000008096 Pongo abelii ENSPPYG00000008096 I
ENSSARG00000006773 Sorex araneus ENSSARG00000006773 I
ENSSHAG00000013650 Sarcophilus harrisii ENSSHAG00000013650 I
ENSSSCG00000022921 Sus scrofa ENSSSCG00000022921 I
ENSSTOG00000028981 Ictidomys tridecemlineatus ENSSTOG00000028981 I
FOXN1 Felis catus ENSFCAG00000008268 I
FOXN1 Canis familiaris ENSCAFG00000018709 I
FOXN1 Pan troglodytes ENSPTRG00000008920 I
FOXN1 Bos taurus ENSBTAG00000013095 I
FOXN1 Pteropus vampyrus ENSPVAG00000002892 I
Foxn1 Rattus norvegicus ENSRNOG00000010870 I
FOXN1 Sus scrofa ENSSSCG00000017762 I
FOXN1 Tupaia belangeri ENSTBEG00000007940 I
FOXN1 Taeniopygia guttata ENSTGUG00000005999 I
FOXN1 Tursiops truncatus ENSTTRG00000004014 I
FOXN1 Dasypus novemcinctus ENSDNOG00000006144 I
FOXN1 Cavia porcellus ENSCPOG00000009810 I
FOXN1 Callithrix jacchus ENSCJAG00000012705 I
FOXN1 Ochotona princeps ENSOPRG00000012389 I
FOXN1 Homo sapiens ENSG00000109101 D
FOXN1 Gorilla gorilla ENSGGOG00000009682 I
FOXN1 Loxodonta africana ENSLAFG00000014501 I
FOXN1 Meleagris gallopavo ENSMGAG00000005734 I
FOXN1 Microcebus murinus ENSMICG00000016795 I
FOXN1 Myotis lucifugus ENSMLUG00000012353 I
FOXN1 Macaca mulatta ENSMMUG00000021975 I
FOXN1 Monodelphis domestica ENSMODG00000019251 I
FOXN1 Echinops telfairi ENSETEG00000015002 I
Foxn1 Mus musculus ENSMUSG00000002057 D
FOXN1 Erinaceus europaeus ENSEEUG00000006629 I
FOXN1 Equus caballus ENSECAG00000010691 I
Foxn1 Dipodomys ordii ENSDORG00000015116 I
FOXN1 Oryctolagus cuniculus ENSOCUG00000013779 I
FOXN1 Otolemur garnettii ENSOGAG00000007093 I
FOXN1 Procavia capensis ENSPCAG00000010796 I
Gfo_R011440 Geospiza fortis Gfo_R011440 I
Myotis_brandtii_Foxn1_10015981 Myotis brandtii Myotis_brandtii_Foxn1_10015981 I
Ogr03484 Ophisaurus gracilis Ogr03484 I
Tal_R011069 Tyto alba Tal_R011069 I
XP_002937190 Xenopus tropicalis XP_002937190 I