CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh5_synt.C_400033
(
Volvox carteri
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
estExt_fgenesh5_synt.C_400033
T015980_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh5_synt.C_400033
ARID/BRIGHT
449
543
TESQFYDDLVEFLTLLRGKPIDRVRFPEAVLNGVSLDLFGLYREVVTRGGFRVGNGINWKGQVFPRMRNWTETNKQTGVGNALKRHYQNYLWEYE
Links
Other
ARID/BRIGHT
family TFs
Other
Volvox carteri
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
7655_YGL013C
Saccharomyces mikatae
7655_YGL013C
I
8420_Multiple
Saccharomyces paradoxus
8420_Multiple
I
8710_YGL013C
Saccharomyces bayanus
8710_YGL013C
I