CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_7000557
(
Mycosphaerella graminicola
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
fgenesh1_pg.C_chr_7000557
T016000_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_7000557
ARID/BRIGHT
633
724
PRQKFFSDLSALHSKTKQQIDAASSVMGIADGNALDIDMFELRLMIETTSFNHSQDVSHWNQLAQMLCDGRMVAEGAGEKLRDFYRQWIHPL
fgenesh1_pg.C_chr_7000557
ARID/BRIGHT
852
954
RETRELASLKQHCSEQLPLLEFLAPRHNTTVLALYDYSIHGVKISLYGLYEAYRKQVDSYGSFNHTTSPEVWSSLAHDLHLSHVNGAPLDYVYATFEKMLRPF
fgenesh1_pg.C_chr_7000557
ARID/BRIGHT
960
1058
RHAFNTTLNLFDDRATFQQLFDRDVAGLVPIGPLSLGRNVVDPLRLYSAVEDRGFDRISNNLTQWDEIADYLGCANQTTAHSETAGHALRDAYLTILGG
Links
Other
ARID/BRIGHT
family TFs
Other
Mycosphaerella graminicola
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUN006467
Anopheles funestus
AFUN006467
N
AGAP000585
Anopheles gambiae
AGAP000585
N
AMAM005389
Anopheles maculatus
AMAM005389
N
AMEC019576
Anopheles melas
AMEC019576
N
AQUA000854
Anopheles quadriannulatus
AQUA000854
N
ASIS013535
Anopheles sinensis
ASIS013535
N
ASTEI04402
Anopheles stephensi
ASTEI04402
N
GA22516
Drosophila pseudoobscura
FBgn0243919
N
GE16131
Drosophila yakuba
FBgn0233677
N
GG19479
Drosophila erecta
FBgn0111682
N
GH17833
Drosophila grimshawi
FBgn0125302
N
GM17578
Drosophila sechellia
FBgn0172486
N
LCUP004567
Lucilia cuprina
LCUP004567
N