CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000287313
(
Malus domestica
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
MDP0000287313
T016148_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000287313
ARID/BRIGHT
100
188
DSKTFELEYSRFWEDHCGKKLRKRVVFEGEELDLCKLFNAVKRYGGYDKVVKGKKWAEVARFVTPLIKISECSKHVLCQLYRDHLFDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Malus domestica
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm1891
Brugia malayi
Bm1891
N
BTMF_0001195401
Brugia timori
BTMF_0001195401
N
CJA11729
Caenorhabditis japonica
CJA11729
N
D917_06367
Trichinella nativa
D917_06367
N
EEL_0001008901
Elaeophora elaphi
EEL_0001008901
N
EFV52694
Trichinella spiralis
EFV52694
N
ENSGMOG00000012045
Gadus morhua
ENSGMOG00000012045
N
GPLIN_000077900
Globodera pallida
GPLIN_000077900
N
HelroG192533
Helobdella robusta
HelroG192533
N
LOAG_17326
Loa loa
LOAG_17326
N
nAv.1.0.1.g00338
Acanthocheilonema viteae
nAv.1.0.1.g00338
N
nDi.2.2.2.g04479
Dirofilaria immitis
nDi.2.2.2.g04479
N
nLs.2.1.2.g09434
Litomosoides sigmodontis
nLs.2.1.2.g09434
N
nOo.2.0.1.g08403
Onchocerca ochengi
nOo.2.0.1.g08403
N
OFLC_0001383401
Onchocerca flexuosa
OFLC_0001383401
N
PPA05721
Pristionchus pacificus
PPA05721
N
SBAD_0000668001
Soboliphyme baturini
SBAD_0000668001
N
scaffold2015-EXSNAP2012.2
Pristionchus exspectatus
scaffold2015-EXSNAP2012.2
N
TCLT_0000619901
Thelazia callipaeda
TCLT_0000619901
N
TCNE_0000128301
Toxocara canis
TCNE_0000128301
N
TMUE_s0224000200
Trichuris muris
TMUE_s0224000200
N
WBGene00237224
Onchocerca volvulus
WBGene00237224
N
WUBG_00477
Wuchereria bancrofti
WUBG_00477
N