LCUP005990 (Lucilia cuprina)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 LCUP005990 T016210_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.670 1.000
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.670 1.000
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.670 1.000
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.670 1.000
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.670 0.785
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.605 0.738
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.591 0.785
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.591 0.785
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.591 0.785
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.591 0.785
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.591 0.785
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.591 0.785
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.555 0.477
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.529 0.769
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.503 0.385
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.471 0.385
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP005990-PA ARID/BRIGHT 1 66

Links

Other ARID/BRIGHT family TFs
Other Lucilia cuprina TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N
AALB000200 Anopheles albimanus AALB000200 I
AARA003793 Anopheles arabiensis AARA003793 I
AATE012724 Anopheles atroparvus AATE012724 I
ACEP23825 Atta cephalotes ACEP23825 I
ACHR008323 Anopheles christyi ACHR008323 I
ACOM029390 Anopheles coluzzii ACOM029390 I
ACUA027275 Anopheles culicifacies ACUA027275 I
ADIR009414 Anopheles dirus ADIR009414 I
AEPI007123 Anopheles epiroticus AEPI007123 I
AFUN010726 Anopheles funestus AFUN010726 I
AGAP009983 Anopheles gambiae AGAP009983 I
AMAM007264 Anopheles maculatus AMAM007264 I
AMEC011376 Anopheles melas AMEC011376 I
AMEM008272 Anopheles merus AMEM008272 I
AMIN006744 Anopheles minimus AMIN006744 I
AQUA009094 Anopheles quadriannulatus AQUA009094 I
ASIS002214 Anopheles sinensis ASIS002214 I
ASTEI03995 Anopheles stephensi ASTEI03995 I
BGIBMGA009116 Bombyx mori BGIBMGA009116 I
Cflo_08671--XP_001121050.1_APIME Camponotus floridanus Cflo_08671--XP_001121050.1_APIME I
CLEC001934 Cimex lectularius CLEC001934 I
CPIJ003113 Culex quinquefasciatus CPIJ003113 I
CpipJ_CPIJ003113 Culex pipiens CpipJ_CPIJ003113 I
GA11011 Drosophila pseudoobscura FBgn0071067 I
GB46156 Apis mellifera GB46156 N
GD22993 Drosophila simulans FBgn0194385 I
GE16494 Drosophila yakuba FBgn0234011 I
GF14859 Drosophila ananassae FBgn0091886 I
GG24687 Drosophila erecta FBgn0116818 I
GH10058 Drosophila grimshawi FBgn0117539 I
GI16429 Drosophila mojavensis FBgn0139177 I
GJ16214 Drosophila virilis FBgn0203399 I
GK21091 Drosophila willistoni FBgn0223083 I
GL13900 Drosophila persimilis FBgn0151505 I
GM16704 Drosophila sechellia FBgn0171617 I
HHAL005211-PA Halyomorpha halys HHAL005211-PA I
HMEL016722 Heliconius melpomene HMEL016722 N
Hsal_05296--XP_001121050.1_APIME Harpegnathos saltator Hsal_05296--XP_001121050.1_APIME N
KGM_16315 Danaus plexippus KGM_16315 N
L798_06974 Zootermopsis nevadensis L798_06974 I
LCUP006840 Lucilia cuprina LCUP006840 I
LDEC018964 Leptinotarsa decemlineata LDEC018964 N
MCINX005941 Melitaea cinxia MCINX005941 N
MDOA010091 Musca domestica MDOA010091 I
net Drosophila melanogaster FBgn0002931 D
PHUM129210 Pediculus humanus PHUM129210 I
PPAI008042 Phlebotomus papatasi PPAI008042 N
SINV15468 Solenopsis invicta SINV15468 I
TC005579 Tribolium castaneum TC005579 N
YQE_06569 Dendroctonus ponderosae YQE_06569 N