PDK_20s1315201g001 (Phoenix dactylifera)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 PDK_20s1315201g001 T016317_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.684 0.831
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.588 0.687
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1315201g001 ARID/BRIGHT 372 466

Links

Other ARID/BRIGHT family TFs
Other Phoenix dactylifera TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra028780 Brassica rapa Bra028780 I
Lus10036413.g Linum usitatissimum Lus10036413.g N
MDP0000289018 Malus domestica MDP0000289018 I
Pm017050 Prunus mume Pm017050 I
POPTR_0010s24710 Populus trichocarpa POPTR_0010s24710 I
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I