CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra030497
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra030497
T018908_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra030497.1-P
B3
54
160
FDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVITKGWSRFVKEKKLDAGDIVSFQRGIGDESKRLKLYIDWRHRP
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191136
Agaricus bisporus
AGABI2DRAFT_191136
N
0.000
BN946_scf184939.g72
Trametes cinnabarina
BN946_scf184939.g72
N
0.000
CC1G_07059
Coprinopsis cinerea
CC1G_07059
N
0.000
CY34DRAFT_12675
Suillus luteus
CY34DRAFT_12675
N
0.000
fgenesh1_pg.C_scaffold_4000174
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000174
N
0.000
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.000
GALMADRAFT_244440
Galerina marginata
GALMADRAFT_244440
N
0.000
GLOTRDRAFT_78300
Gloeophyllum trabeum
GLOTRDRAFT_78300
N
0.000
HETIRDRAFT_439748
Heterobasidion irregulare
HETIRDRAFT_439748
N
0.000
JAAARDRAFT_194246
Jaapia argillacea
JAAARDRAFT_194246
N
0.000
JAAARDRAFT_47740
Jaapia argillacea
JAAARDRAFT_47740
N
0.000
K443DRAFT_670658
Laccaria amethystina
K443DRAFT_670658
N
0.000
LACBIDRAFT_296989
Laccaria bicolor
LACBIDRAFT_296989
N
0.000
M378DRAFT_463994
Amanita muscaria
M378DRAFT_463994
I
0.000
M378DRAFT_9324
Amanita muscaria
M378DRAFT_9324
N
0.000
M413DRAFT_29155
Hebeloma cylindrosporum
M413DRAFT_29155
N
0.000
Moror_12870
Moniliophthora roreri
Moror_12870
N
0.000
PAXINDRAFT_170453
Paxillus involutus
PAXINDRAFT_170453
N
0.000
PAXRUDRAFT_822144
Paxillus rubicundulus
PAXRUDRAFT_822144
N
0.000
PHLGIDRAFT_125548
Phlebiopsis gigantea
PHLGIDRAFT_125548
N
0.000
PILCRDRAFT_401124
Piloderma croceum
PILCRDRAFT_401124
N
0.000
PILCRDRAFT_819471
Piloderma croceum
PILCRDRAFT_819471
N
0.000
PISMIDRAFT_112540
Pisolithus microcarpus
PISMIDRAFT_112540
N
0.000
PLEOSDRAFT_174562
Pleurotus ostreatus
PLEOSDRAFT_174562
N
0.000
PLICRDRAFT_45259
Plicaturopsis crispa
PLICRDRAFT_45259
N
0.000
SCHCODRAFT_76401
Schizophyllum commune
SCHCODRAFT_76401
N
0.000
SERLA73DRAFT_181394
Serpula lacrymans
SERLA73DRAFT_181394
N
0.000