CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G29480_001
(
Musa acuminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GSMUA_Achr9G29480_001
T019536_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.753
0.753
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P29480_001
B3
85
187
FAKILTPSDANNGGGFSVPRFCADSIFPRLDFNAYPPAQFILVYDVHGNHWKFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRNSSGQILVGIRRTS
Links
Other
B3
family TFs
Other
Musa acuminata
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R003320
Calypte anna
Aan_R003320
N
0.000
Afo_R009911
Aptenodytes forsteri
Afo_R009911
N
0.000
Alligator_sinensis_CCG014285.1
Alligator sinensis
Alligator_sinensis_CCG014285.1
N
0.000
Brh_R012356
Buceros rhinoceros
Brh_R012356
N
0.000
CapteG161824
Capitella teleta
CapteG161824
N
0.000
CGI_10026935
Crassostrea gigas
CGI_10026935
N
0.000
ENSAPLG00000014035
Anas platyrhynchos
ENSAPLG00000014035
N
0.000
ENSFALG00000012779
Ficedula albicollis
ENSFALG00000012779
N
0.000
ENSGALG00000000983
Gallus gallus
ENSGALG00000000983
N
0.000
ENSLACG00000003590
Latimeria chalumnae
ENSLACG00000003590
N
0.000
ENSTGUG00000003474
Taeniopygia guttata
ENSTGUG00000003474
N
0.000
estExt_fgenesh2_pg.C_1230031
Branchiostoma floridae
estExt_fgenesh2_pg.C_1230031
N
0.000
Gfo_R014039
Geospiza fortis
Gfo_R014039
N
0.000
L3MBTL1
Meleagris gallopavo
ENSMGAG00000000827
N
0.000
L3MBTL1
Loxodonta africana
ENSLAFG00000012575
N
0.000
L3MBTL1
Cavia porcellus
ENSCPOG00000008941
N
0.000
Sakowv30043999m.g
Saccoglossus kowalevskii
Sakowv30043999m.g
N
0.000
SMAR015290
Strigamia maritima
SMAR015290
N
0.000
SPU_021123
Strongylocentrotus purpuratus
SPU_021123
N
0.000
Tal_R013237
Tyto alba
Tal_R013237
N
0.000