CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM04G22780
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM04G22780
T020082_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G22780.1
B3
87
192
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRA
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
321 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000016851
Ailuropoda melanoleuca
ENSAMEG00000016851
I
ENSBTAP00000001420-D1
Bos grunniens
ENSBTAP00000001420-D1
I
ENSCSAG00000011345
Chlorocebus sabaeus
ENSCSAG00000011345
I
ENSLAFG00000026238
Loxodonta africana
ENSLAFG00000026238
N
ENSLAFG00000027365
Loxodonta africana
ENSLAFG00000027365
I
ENSLAFG00000027669
Loxodonta africana
ENSLAFG00000027669
N
ENSLAFG00000028299
Loxodonta africana
ENSLAFG00000028299
I
ENSLAFG00000028692
Loxodonta africana
ENSLAFG00000028692
I
ENSLAFG00000030880
Loxodonta africana
ENSLAFG00000030880
I
ENSLAFG00000032042
Loxodonta africana
ENSLAFG00000032042
I
ENSMLUG00000006411
Myotis lucifugus
ENSMLUG00000006411
I
ENSMPUG00000009017
Mustela putorius furo
ENSMPUG00000009017
I
ENSOCUG00000001138
Oryctolagus cuniculus
ENSOCUG00000001138
I
ENSP00000269305
Macaca fascicularis
ENSP00000269305
I
ENSPANG00000024061
Papio anubis
ENSPANG00000024061
I
ENSPPYG00000007934
Pongo abelii
ENSPPYG00000007934
I
ENSSTOG00000022774
Ictidomys tridecemlineatus
ENSSTOG00000022774
I
Myotis_brandtii_TP53_10021059
Myotis brandtii
Myotis_brandtii_TP53_10021059
I
TP53
Procavia capensis
ENSPCAG00000012725
I
TP53
Macaca mulatta
ENSMMUG00000008639
I
TP53
Pan troglodytes
ENSPTRG00000008703
I
TP53
Sus scrofa
ENSSSCG00000017950
I
TP53
Gorilla gorilla
ENSGGOG00000009786
I
TP53
Tursiops truncatus
ENSTTRG00000010250
I
TP53
Homo sapiens
ENSG00000141510
D
TP53
Felis catus
ENSFCAG00000009623
I
TP53
Canis familiaris
ENSCAFG00000016714
I