CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_015005
(
Oryza longistaminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OLONG_015005
T020165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_015005-R1
B3
53
135
WLSLQAVPTKFANIIRGQISGVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQRDILVFTYSGSSRFKVRIFNPS
OLONG_015005-R1
B3
193
281
TVLPPVLLDKLTIPKMFAKNVQGLISGVAKLEVPDGKTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFGYSGNSHFKVQIFNPR
OLONG_015005-R1
B3
298
383
KVGINVEGAIPKKFAANVRGKIPEQVRLEVSDGKIYNVQVTEEQDELVLRSGWANFASAYQLKHGDLLVFIHSGHSHFKVLIFDPS
OLONG_015005-R1
B3
499
596
YITAMDRTSVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMGTDDLYALSTGWLDFFRSNLLQEGDICVFEASKSKRGVSLTFHPFKES
OLONG_015005-R1
B3
663
771
FLSVMRSSNCTRQSSLGNLHFPYIQCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRIDTSTNLHKLLKGWGKFVKDNKLEVHGICLFQLMKNKKKLTMTVHIIRKG
OLONG_015005-R1
B3
842
941
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNKKKLMMMVHIIRKS
OLONG_015005-R2
B3
53
135
WLSLQAVPTKFANIIRGQISGVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQRDILVFTYSGSSRFKVRIFNPS
OLONG_015005-R2
B3
193
281
TVLPPVLLDKLTIPKMFAKNVQGLISGVAKLEVPDGKTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFGYSGNSHFKVQIFNPR
OLONG_015005-R2
B3
298
383
KVGINVEGAIPKKFAANVRGKIPEQVRLEVSDGKIYNVQVTEEQDELVLRSGWANFASAYQLKHGDLLVFIHSGHSHFKVLIFDPS
OLONG_015005-R2
B3
499
596
YITAMDRTSVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMGTDDLYALSTGWLDFFRSNLLQEGDICVFEASKSKRGVSLTFHPFKES
OLONG_015005-R2
B3
650
749
FLSVMRSSNCTRQSSLCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRIDTSTNLHKLLKGWGKFVKDNKLEVHGICLFQLMKNKKKLTMTVHIIRKG
OLONG_015005-R2
B3
820
919
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNKKKLMMMVHIIRKS
OLONG_015005-R3
B3
53
135
WLSLQAVPTKFANIIRGQISGVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQRDILVFTYSGSSRFKVRIFNPS
OLONG_015005-R3
B3
193
281
TVLPPVLLDKLTIPKMFAKNVQGLISGVAKLEVPDGKTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFGYSGNSHFKVQIFNPR
OLONG_015005-R3
B3
298
383
KVGINVEGAIPKKFAANVRGKIPEQVRLEVSDGKIYNVQVTEEQDELVLRSGWANFASAYQLKHGDLLVFIHSGHSHFKVLIFDPS
OLONG_015005-R3
B3
499
596
YITAMDRTSVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMGTDDLYALSTGWLDFFRSNLLQEGDICVFEASKSKRGVSLTFHPFKES
OLONG_015005-R3
B3
663
762
FLSVMRSSNCTRQSSLCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRIDTSTNLHKLLKGWGKFVKDNKLEVHGICLFQLMKNKKKLTMTVHIIRKG
OLONG_015005-R3
B3
833
932
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKIKLGDICLFQLMKNKKKLMMMVHIIRKS
Links
Other
B3
family TFs
Other
Oryza longistaminata
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g18350
Steinernema scapterisci
L892_g18350
N