ORUFI04G20430 (Oryza rufipogon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORUFI04G20430 T020551_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.772 0.772
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G20430.1 B3 118 215

Links

Other B3 family TFs
Other Oryza rufipogon TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
OB04G29620 Oryza brachyantha OB04G29620 N 0.000
OBART02G28020 Oryza barthii OBART02G28020 N 0.000
OBART04G22740 Oryza barthii OBART04G22740 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
OLONG_005829 Oryza longistaminata OLONG_005829 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.000
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
OPUNC04G20350 Oryza punctata OPUNC04G20350 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.Gb01009 Panicum virgatum Pavir.Gb01009 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Sb06g026240 Sorghum bicolor Sb06g026240 N 0.000
Si009601m.g Setaria italica Si009601m.g N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.000