CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0017s08820
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0017s08820
T020931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FUS3
M06706_2.00
Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW
Dap-seq
OMalley et al.(2016)
FUS3_col_a
0.888
0.888
FUS3
M09773_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FUS3_Q2
0.888
0.888
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0017s08820.1
B3
98
200
FQKELKNSDVSSLRRIILPKKAAEAHLPALESKEGIFIRMDDLDGLHAWSFKYRYWPNNNSRMYVLENTGDFVSAHGLELGDFIMVYQDNQSQNYVIQAKKAS
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_02464
Echinococcus canadensis
ECANG7_02464
N
EmuJ_001041200
Echinococcus multilocularis
EmuJ_001041200
N