CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm030422
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm030422
T022139_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm030422
B3
11
108
QKVITATDVGRLVVTREILAVLPPVNPGNDISINVFDSQTDRVYVFKLAGRRGRYLKSVLQSRGWKHFVNDRGIAVGDVVCFWEEENSIYQTQYRIAL
Links
Other
B3
family TFs
Other
Prunus mume
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf01616-processed-gene-0.3
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01616-processed-gene-0.3
N
augustus_masked-nMf.1.1.scaf30007-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf30007-processed-gene-0.0
N
maker-nMf.1.1.scaf00197-augustus-gene-0.27
Meloidogyne floridensis
maker-nMf.1.1.scaf00197-augustus-gene-0.27
N
maker-nMf.1.1.scaf06459-augustus-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06459-augustus-gene-0.8
N
MhA1_Contig2757.frz3.gene5
Meloidogyne hapla
MhA1_Contig2757.frz3.gene5
N