CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000139073
(
Malus domestica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
MDP0000139073
T023597_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000139073
B3
116
218
FCKVLTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLSAGDSFVFLRGGNGELRVGVRRLA
Links
Other
B3
family TFs
Other
Malus domestica
TFs
406 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_079180
Acremonium chrysogenum
ACRE_079180
I
BBA_04449
Beauveria bassiana
BBA_04449
I
Bcin07g02960
Botrytis cinerea
Bcin07g02960
I
BOTBODRAFT_92498
Botryobasidium botryosum
BOTBODRAFT_92498
I
CCM_07005
Cordyceps militaris
CCM_07005
I
CFIO01_10932
Colletotrichum fioriniae
CFIO01_10932
I
CGGC5_4872
Colletotrichum gloeosporioides
CGGC5_4872
I
CH063_09324
Colletotrichum higginsianum
CH063_09324
I
CHGG_05891
Chaetomium globosum
CHGG_05891
I
CMQ_8013
Grosmannia clavigera
CMQ_8013
I
Cob_08105
Colletotrichum orbiculare
Cob_08105
I
CPUR_03253
Claviceps purpurea
CPUR_03253
I
CSUB01_03838
Colletotrichum sublineola
CSUB01_03838
I
CTHT_0009000
Chaetomium thermophilum
CTHT_0009000
I
estExt_fgenesh1_pm.C_140003
Cryphonectria parasitica
estExt_fgenesh1_pm.C_140003
I
estExt_Genewise1.C_40527
Neurospora discreta
estExt_Genewise1.C_40527
I
F503_01009
Ophiostoma piceae uamh
F503_01009
I
FFUJ_01365
Fusarium fujikuroi
FFUJ_01365
I
FGRRES_15831
Fusarium graminearum
FGRRES_15831
I
FOXG_00218
Fusarium oxysporum
FOXG_00218
I
FPSE_02604
Fusarium pseudograminearum
FPSE_02604
I
FVEG_01300
Fusarium verticillioides
FVEG_01300
I
GGTG_04163
Gaeumannomyces graminis
GGTG_04163
I
GLRG_04053
Colletotrichum graminicola
GLRG_04053
I
HMPREF1624_03694
Sporothrix schenckii
HMPREF1624_03694
I
MAC_04202
Metarhizium acridum
MAC_04202
I
MAM_07644
Metarhizium album
MAM_07644
I
MANI_024675
Metarhizium anisopliae
MANI_024675
I
MAPG_00558
Magnaporthe poae
MAPG_00558
I
MBR_03633
Metarhizium brunneum
MBR_03633
I
MGG_10837
Magnaporthe oryzae
MGG_10837
I
MGU_04823
Metarhizium guizhouense
MGU_04823
I
MYCTH_2296905
Myceliophthora thermophila
MYCTH_2296905
I
NCU02957
Neurospora crassa
NCU02957
D
NEUTE1DRAFT_150703
Neurospora tetrasperma
NEUTE1DRAFT_150703
I
OIDMADRAFT_110480
Oidiodendron maius
OIDMADRAFT_110480
I
OIDMADRAFT_57256
Oidiodendron maius
OIDMADRAFT_57256
I
PFICI_01786
Pestalotiopsis fici
PFICI_01786
I
PODANS_1_18420
Podospora anserina
PODANS_1_18420
I
S40285_00887
Stachybotrys chlorohalonata
S40285_00887
I
S40288_08146
Stachybotrys chartarum
S40288_08146
I
SAPIO_CDS5040
Scedosporium apiospermum
SAPIO_CDS5040
I
SBOR_5241
Sclerotinia borealis
SBOR_5241
I
SMAC_00493
Sordaria macrospora
SMAC_00493
I
SPBR_01576
Sporothrix brasiliensis
SPBR_01576
I
SS1G_01995
Sclerotinia sclerotiorum
SS1G_01995
I
THITE_2112332
Thielavia terrestris
THITE_2112332
I
TRIATDRAFT_299973
Trichoderma atroviride
TRIATDRAFT_299973
I
TRIREDRAFT_122371
Trichoderma reesei
TRIREDRAFT_122371
I
TRIVIDRAFT_35604
Trichoderma virens
TRIVIDRAFT_35604
I
UV8b_5697
Ustilaginoidea virens
UV8b_5697
I
VDAG_03292
Verticillium dahliae
VDAG_03292
I
VDBG_06134
Verticillium alfalfae
VDBG_06134
I
VDBG_06134
Verticillium albo atrum
VDBG_06134
I
VHEMI06417
Torrubiella hemipterigena
VHEMI06417
I
X797_003690
Metarhizium robertsii
X797_003690
I