orange1.1g012439m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g012439m.g T023732_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.857 0.857
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g012439m B3 137 239

Links

Other B3 family TFs
Other Citrus sinensis TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CANTEDRAFT_116020 Candida tenuis CANTEDRAFT_116020 N
CaO19.2119 Candida albicans CaO19.2119 N
CaO19.9667 Candida albicans CaO19.9667 N
CD36_15120 Candida dubliniensis CD36_15120 N
CORT_0A12970 Candida orthopsilosis CORT_0A12970 N
CPAG_04608 Candida parapsilosis CPAG_04608 N
CTRG_01097 Candida tropicalis CTRG_01097 N
DEHA2A07282g Debaryomyces hansenii DEHA2A07282g N
estExt_gwp_genewisePlus_worm.C_chr_2.10311 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_2.10311 N
G210_4959 Candida maltosa G210_4959 N
GNLVRS01_PISO0D05503g Millerozyma farinosa GNLVRS01_PISO0D05503g N
LELG_01178 Lodderomyces elongisporus LELG_01178 N
PGUG_02096 Candida guilliermondii PGUG_02096 N
PGUG_02096 Meyerozyma guilliermondii PGUG_02096 N
PICST_81430 Scheffersomyces stipitis PICST_81430 N
SPAPADRAFT_60902 Spathaspora passalidarum SPAPADRAFT_60902 N