CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa01439
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Aa01439
T023777_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa01439.1.p
B3
290
382
FAFFKFIYNRFEEFLLIPPAVAHKLADLTNQHVYLEDSEEKRSKVRLSVVNDSLAFHQGWNIFVSDHSIKWGEFLLFDYIARNTFSVRVFGLN
Pavir.Aa01439.1.p
B3
830
923
LQLCVPDTTRKWLELSKSLPNAIKQKRHDRNVILLKDPMKRLWPVLYHENPVFVGFTAGWRHFVAANNLQSGDLCDLIKEPDDDEPVYSVLITR
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026934
Oryza indica
BGIOSGA026934
N
LPERR08G12970
Leersia perrieri
LPERR08G12970
N
OB08G23190
Oryza brachyantha
OB08G23190
N
OBART08G15710
Oryza barthii
OBART08G15710
N
OGLUM08G16460
Oryza glumaepatula
OGLUM08G16460
N
OLONG_004505
Oryza longistaminata
OLONG_004505
N
OMERI08G13000
Oryza meridionalis
OMERI08G13000
N
ONIVA08G16830
Oryza nivara
ONIVA08G16830
N
OPUNC08G13780
Oryza punctata
OPUNC08G13780
N
ORGLA08G0137900
Oryza glaberrima
ORGLA08G0137900
N
OS08G0433500
Oryza sativa
OS08G0433500
N
Sb07g021200
Sorghum bicolor
Sb07g021200
N