CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib00539
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ib00539
T023911_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib00539.1.p
B3
54
145
FVKAMLHSHVVRGFWLGLPSHFCDTYMPKQDSIITLVDEKDEEFDTNYLAYKKGLSGGWAGFAICHGMQDGDAAVFQLIKPTTFKVHIIRVS
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_122840
Agaricus bisporus
AGABI2DRAFT_122840
N
BOTBODRAFT_173998
Botryobasidium botryosum
BOTBODRAFT_173998
N
CC1G_12253
Coprinopsis cinerea
CC1G_12253
N
CY34DRAFT_41394
Suillus luteus
CY34DRAFT_41394
N
DICSQDRAFT_15457
Dichomitus squalens
DICSQDRAFT_15457
N
fgenesh1_pg.C_scaffold_27000033
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_27000033
N
FOMPIDRAFT_31533
Fomitopsis pinicola
FOMPIDRAFT_31533
N
GALMADRAFT_262763
Galerina marginata
GALMADRAFT_262763
N
gw1.4.1016.1
Heterobasidion annosum
gw1.4.1016.1
N
HETIRDRAFT_18789
Heterobasidion irregulare
HETIRDRAFT_18789
N
JAAARDRAFT_27573
Jaapia argillacea
JAAARDRAFT_27573
N
K443DRAFT_677044
Laccaria amethystina
K443DRAFT_677044
N
LACBIDRAFT_296037
Laccaria bicolor
LACBIDRAFT_296037
N
M378DRAFT_194259
Amanita muscaria
M378DRAFT_194259
N
M404DRAFT_1000446
Pisolithus tinctorius
M404DRAFT_1000446
N
M413DRAFT_447606
Hebeloma cylindrosporum
M413DRAFT_447606
N
Moror_5777
Moniliophthora roreri
Moror_5777
N
MPER_08759
Moniliophthora perniciosa
MPER_08759
N
PAXRUDRAFT_826503
Paxillus rubicundulus
PAXRUDRAFT_826503
N
PHACADRAFT_251015
Phanerochaete carnosa
PHACADRAFT_251015
N
PILCRDRAFT_596287
Piloderma croceum
PILCRDRAFT_596287
N
PISMIDRAFT_36525
Pisolithus microcarpus
PISMIDRAFT_36525
N
PLEOSDRAFT_9817
Pleurotus ostreatus
PLEOSDRAFT_9817
N
POSPLDRAFT_93658
Postia placenta
POSPLDRAFT_93658
N
SCLCIDRAFT_94331
Scleroderma citrinum
SCLCIDRAFT_94331
N