BPC5 (Arabidopsis thaliana)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 AT4G38910 T024521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC5
M06717_2.00		 Arabidopsis thaliana
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT		 Dap-seq
OMalley et al.(2016)
BPC5_col_a		 (Direct) (Direct)
BPC5
M06718_2.00		 Arabidopsis thaliana
RRRRVNRRGAGARAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTYTCTCYYNBYYYY		 Dap-seq
OMalley et al.(2016)
BPC5_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G38910.1 BBR 2 258
AT4G38910.2 BBR 1 283

Links

Other BBR family TFs
Other Arabidopsis thaliana TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_059380 Acremonium chrysogenum ACRE_059380 N
BBA_02350 Beauveria bassiana BBA_02350 N
CCM_03446 Cordyceps militaris CCM_03446 N
CPUR_07239 Claviceps purpurea CPUR_07239 N
e_gw1.2.1343.1 Nectria haematococca e_gw1.2.1343.1 N
FFUJ_06166 Fusarium fujikuroi FFUJ_06166 N
FGRRES_08646 Fusarium graminearum FGRRES_08646 N
FOXG_03154 Fusarium oxysporum FOXG_03154 N
FPSE_11569 Fusarium pseudograminearum FPSE_11569 N
FVEG_02020 Fusarium verticillioides FVEG_02020 N
MAC_00924 Metarhizium acridum MAC_00924 N
MAJ_03821 Metarhizium majus MAJ_03821 N
MAM_03208 Metarhizium album MAM_03208 N
MBR_08316 Metarhizium brunneum MBR_08316 N
MGU_03487 Metarhizium guizhouense MGU_03487 N
NechaG36483 Fusarium solani NechaG36483 N
OCS_00981 Ophiocordyceps sinensis OCS_00981 N
TRIATDRAFT_293987 Trichoderma atroviride TRIATDRAFT_293987 N
TRIREDRAFT_106048 Trichoderma reesei TRIREDRAFT_106048 N
VHEMI06982 Torrubiella hemipterigena VHEMI06982 N
X797_003612 Metarhizium robertsii X797_003612 N