CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA06G02210
(
Oryza nivara
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
ONIVA06G02210
T024678_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA06G02210.1
BBR
1
331
MDNLGHRENGRQRPDQYKGLHTQWMMPQTQRHLKDHQSMNLLALMNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELARTNGLNMNNGNGFPQGSLSGSKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPISTAPGSAGKAKRPKKNSSQASPLKRPSGVLRKTKKPSGDWKNVGMSGCGDDSAHASVMKNEWKDQNLGLNQVAFDESTMPAPACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPVMPNKRHARMGGRKMSGGAFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR
Links
Other
BBR
family TFs
Other
Oryza nivara
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022010
Oryza indica
BGIOSGA022010
N
0.788
Bra003405
Brassica rapa
Bra003405
I
0.707
BRADI1G49980
Brachypodium distachyon
BRADI1G49980
N
0.755
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
GRMZM2G118690
Zea mays
GRMZM2G118690
N
0.783
LPERR06G01660
Leersia perrieri
LPERR06G01660
N
0.953
MLOC_15776
Hordeum vulgare
MLOC_15776
N
0.876
OB06G11850
Oryza brachyantha
OB06G11850
N
0.964
OBART06G01840
Oryza barthii
OBART06G01840
N
1.000
OGLUM06G01860
Oryza glumaepatula
OGLUM06G01860
N
1.000
OLONG_020703
Oryza longistaminata
OLONG_020703
N
0.996
OMERI06G01780
Oryza meridionalis
OMERI06G01780
N
0.989
OPUNC06G01720
Oryza punctata
OPUNC06G01720
N
0.982
ORGLA06G0019100
Oryza glaberrima
ORGLA06G0019100
N
1.000
ORUFI06G01870
Oryza rufipogon
ORUFI06G01870
N
1.000
OS06G0130600
Oryza sativa
OS06G0130600
N
0.996
Pavir.Db02349
Panicum virgatum
Pavir.Db02349
N
0.793
Pavir.J00934
Panicum virgatum
Pavir.J00934
N
0.804
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Sb10g002020
Sorghum bicolor
Sb10g002020
N
0.785
Si006972m.g
Setaria italica
Si006972m.g
N
0.844
Traes_4AL_A02408BC8
Triticum aestivum
Traes_4AL_A02408BC8
N
0.877
Traes_7DS_FE8BC1125
Triticum aestivum
Traes_7DS_FE8BC1125
N
0.887
TRIUR3_11677
Triticum urartu
TRIUR3_11677
N
0.865