CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s11180
(
Populus trichocarpa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
POPTR_0010s11180
T024715_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s11180.1
BBR
1
279
MDDDALNMRNWGYYEPSYKEPLGLQLMPAMVDRDSKHLLPRRDPNNIMVGATGAYLPRESLVSDASMHMNYMRDSWINREKFLNMLPPNPSYVVHPETSGAQSMPMLQPPDSSRDERVSRMEEPSVSKEGSQLKKRQVGGTAPKTPKPKKPRKPKDGNNNTVQRAKPAKKSVDVVINGIDMDISGIPIPVCSCTGIPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Populus trichocarpa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCH_Pc21g12810
Penicillium rubens
PCH_Pc21g12810
N
0.000
PDE_05926
Penicillium oxalicum
PDE_05926
N
0.000
PEX1_057760
Penicillium expansum
PEX1_057760
N
0.000
PITC_024470
Penicillium italicum
PITC_024470
N
0.000
PV05_04333
Exophiala xenobiotica
PV05_04333
N
0.000
PV06_01296
Exophiala oligosperma
PV06_01296
N
0.000