CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf000855m
(
Mimulus guttatus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
mgf000855m
T024806_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf000855m
BBR
1
345
MDDSGHRENGRHKPPQGQWLMQQQPSMKQIMGFMAERDAAIQERNLAISEKKTALAERDMAILQRDSAIAERNNAIMERDNAIATLQYRENAINSSNNNMSPCPPGCQIPRGVKHMHHPQQHQQQQQQHIHHHHHQSHMAESPYNNNNNSSNNNNNTRDNMQMSDTVPISPVAPEPTKTRRAKRAKEAKPAATAAPRKASKNSKRVKREEDNNLNDLNNLNKAVFGKSHDMELGGPKLDWKDQDLGLNQVAFDESTMPVPVCSCTGFLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARVGGRKMSGSAFNKLISRLAAEGHDLSNPVDLKDHWAKHDTSF
Links
Other
BBR
family TFs
Other
Mimulus guttatus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra003405
Brassica rapa
Bra003405
I
0.707
cassava22532.valid.m1
Manihot esculenta
cassava22532.valid.m1
I
0.717
chr1.CM0195.10.nd
Lotus japonicus
chr1.CM0195.10.nd
I
0.701
Cucsa.159750
Cucumis sativus
Cucsa.159750
I
0.711
Eucgr.D01054
Eucalyptus grandis
Eucgr.D01054
I
0.725
GLYMA04G02860
Glycine max
GLYMA04G02860
I
0.703
GLYMA06G02880
Glycine max
GLYMA06G02880
I
0.702
mgf005948m
Mimulus guttatus
mgf005948m
N
0.807
PGSC0003DMG400003719
Solanum tuberosum
PGSC0003DMG400003719
I
0.732
PRUPE_ppa008316mg
Prunus persica
PRUPE_ppa008316mg
I
0.702
Solyc04g081170.2
Solanum lycopersicum
Solyc04g081170.2
I
0.725
VIT_18s0001g13730
Vitis vinifera
VIT_18s0001g13730
I
0.725