Bostr.3148s0250 (Boechera stricta)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Bostr.3148s0250 T024826_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.963 0.963
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3148s0250.1.p BBR 1 341
Bostr.3148s0250.2.p BBR 1 337

Links

Other BBR family TFs
Other Boechera stricta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSPATT00001360001 Paramecium tetraurelia GSPATT00001360001 N
GSPATT00002046001 Paramecium tetraurelia GSPATT00002046001 N
GSPATT00003197001 Paramecium tetraurelia GSPATT00003197001 N
GSPATT00004157001 Paramecium tetraurelia GSPATT00004157001 N
GSPATT00004870001 Paramecium tetraurelia GSPATT00004870001 N
GSPATT00010126001 Paramecium tetraurelia GSPATT00010126001 N
GSPATT00017528001 Paramecium tetraurelia GSPATT00017528001 N
GSPATT00030532001 Paramecium tetraurelia GSPATT00030532001 N
TTHERM_00627230 Tetrahymena thermophila TTHERM_00627230 N