ZBED1 (Homo sapiens)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSG00000214717 T025994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBED1
M02771_2.00		 Homo sapiens
HTRTCGCGACATR
YATGTCGCGAYAD		 SELEX
Jolma et al.(2013)
ZBED1_1		 (Direct) (Direct)
ZBED1
M04056_2.00		 Homo sapiens
VTRTCGCGAYAT
ATRTCGCGAYAB		 SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX		 (Direct) (Direct)
ZBED1
M04057_2.00		 Homo sapiens
MTRTCGCGAYAK
MTRTCGCGAYAK		 SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX		 (Direct) (Direct)
ZBED1
M09776_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DREF_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000370616 BED ZF 23 72
ENSP00000370620 BED ZF 23 72
ENSP00000370621 BED ZF 23 72
ENSP00000419148 BED ZF 23 72

Links

Other BED ZF family TFs
Other Homo sapiens TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005744 Calypte anna Aan_R005744 N
ENSCSAG00000018635 Chlorocebus sabaeus ENSCSAG00000018635 N
ENSDNOG00000035421 Dasypus novemcinctus ENSDNOG00000035421 N
ENSFALG00000009491 Ficedula albicollis ENSFALG00000009491 N
ENSGALG00000019432 Gallus gallus ENSGALG00000019432 N
ENSMEUG00000008994 Macropus eugenii ENSMEUG00000008994 N
ENSMGAG00000013045 Meleagris gallopavo ENSMGAG00000013045 N
ENSPANG00000001049 Papio anubis ENSPANG00000001049 N
ENSSHAG00000007559 Sarcophilus harrisii ENSSHAG00000007559 N
Gfo_R013088 Geospiza fortis Gfo_R013088 N
GLRG_08797 Colletotrichum graminicola GLRG_08797 N
HMPREF1624_07492 Sporothrix schenckii HMPREF1624_07492 N
MYCTH_2144297 Myceliophthora thermophila MYCTH_2144297 N
SAPIO_CDS5426 Scedosporium apiospermum SAPIO_CDS5426 N
TIGD5 Tursiops truncatus ENSTTRG00000015171 N
Tigd5 Rattus norvegicus ENSRNOG00000008686 N
TIGD5 Monodelphis domestica ENSMODG00000011207 N
TIGD5 Procavia capensis ENSPCAG00000005650 N
TIGD5 Otolemur garnettii ENSOGAG00000024882 N
TIGD5 Ornithorhynchus anatinus ENSOANG00000003531 N
Tigd5 Mus musculus ENSMUSG00000103906 N
TIGD5 Gorilla gorilla ENSGGOG00000002392 N
TIGD5 Homo sapiens ENSG00000179886 N
XP_002941279 Xenopus tropicalis XP_002941279 N