CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG016427.1
(
Alligator sinensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Alligator_sinensis_CCG016427.1
T027960_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG016427.1
BED ZF
95
141
SVVWDHFELADDPTYAICLHCRAKTIWGKGKNMSTMGMLMHLHRCYP
Links
Other
BED ZF
family TFs
Other
Alligator sinensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG005081.1
Alligator sinensis
Alligator_sinensis_CCG005081.1
N
0.791
Alligator_sinensis_CCG013331.1
Alligator sinensis
Alligator_sinensis_CCG013331.1
N
0.857
Alligator_sinensis_CCG014412.1
Alligator sinensis
Alligator_sinensis_CCG014412.1
N
0.744