CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava7664.valid.m1
(
Manihot esculenta
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
cassava7664.valid.m1
T028077_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava7664.valid.m1
BED ZF
17
68
SVVWNHFERVRKADICYAVCVHCNKRLSGSSNSGTTHLRNHLMRCLKRSNCD
Links
Other
BED ZF
family TFs
Other
Manihot esculenta
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA20508
Drosophila pseudoobscura
FBgn0080502
I
0.000
GD14703
Drosophila simulans
FBgn0186381
I
0.000
GE19908
Drosophila yakuba
FBgn0237238
I
0.000
GF10169
Drosophila ananassae
FBgn0087210
I
0.000
GG13612
Drosophila erecta
FBgn0105877
I
0.000
GI12435
Drosophila mojavensis
FBgn0135192
I
0.000
GJ12331
Drosophila virilis
FBgn0199577
I
0.000
GK16635
Drosophila willistoni
FBgn0218637
I
0.000
GL15578
Drosophila persimilis
FBgn0153182
I
0.000
GM25695
Drosophila sechellia
FBgn0180552
I
0.000
LCUP010832
Lucilia cuprina
LCUP010832
I
0.000
LotgiG80254
Lottia gigantea
LotgiG80254
N
0.000
SMAR001477
Strigamia maritima
SMAR001477
I
0.000
tap
Drosophila melanogaster
FBgn0015550
D
0.000