Carubv10013145m.g (Capsella rubella)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Carubv10013145m.g T028223_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10013143m BED ZF 17 68
Carubv10013145m BED ZF 17 68

Links

Other BED ZF family TFs
Other Capsella rubella TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA014540 Oryza indica BGIOSGA014540 N 0.000
BRADI5G18430 Brachypodium distachyon BRADI5G18430 N 0.000
F775_07886 Aegilops tauschii F775_07886 N 0.000
F775_08955 Aegilops tauschii F775_08955 N 0.000
GRMZM2G057131 Zea mays GRMZM2G057131 N 0.000
GRMZM2G472589 Zea mays GRMZM2G472589 N 0.000
LPERR04G17810 Leersia perrieri LPERR04G17810 N 0.000
MLOC_11130 Hordeum vulgare MLOC_11130 N 0.000
OB04G28790 Oryza brachyantha OB04G28790 N 0.000
OGLUM04G21810 Oryza glumaepatula OGLUM04G21810 N 0.000
OLONG_013577 Oryza longistaminata OLONG_013577 N 0.000
OMERI04G18340 Oryza meridionalis OMERI04G18340 N 0.000
ONIVA04G20320 Oryza nivara ONIVA04G20320 N 0.000
OPUNC04G19530 Oryza punctata OPUNC04G19530 N 0.000
ORGLA04G0188200 Oryza glaberrima ORGLA04G0188200 N 0.000
ORUFI09G04820 Oryza rufipogon ORUFI09G04820 N 0.000
OS04G0564000 Oryza sativa OS04G0564000 N 0.000
Pavir.Ga01021 Panicum virgatum Pavir.Ga01021 N 0.000
Pavir.J21884 Panicum virgatum Pavir.J21884 N 0.000
Sb06g025420 Sorghum bicolor Sb06g025420 N 0.000
Si010837m.g Setaria italica Si010837m.g N 0.000
Si012648m.g Setaria italica Si012648m.g N 0.000
Traes_2AL_39432DCB1 Triticum aestivum Traes_2AL_39432DCB1 N 0.000
Traes_2AL_BC4CD296F Triticum aestivum Traes_2AL_BC4CD296F N 0.000
Traes_2BL_7BC3DF5C7 Triticum aestivum Traes_2BL_7BC3DF5C7 N 0.000
Traes_2BL_E8D551BE0 Triticum aestivum Traes_2BL_E8D551BE0 N 0.000
Traes_2DL_92641C6CC Triticum aestivum Traes_2DL_92641C6CC N 0.000
Traes_2DL_D8AD25F43 Triticum aestivum Traes_2DL_D8AD25F43 N 0.000
TRIUR3_21912 Triticum urartu TRIUR3_21912 N 0.000
TRIUR3_21913 Triticum urartu TRIUR3_21913 N 0.000