gene13122-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene13122-v1.0-hybrid T028287_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13122.1-v1.0-hybrid BED ZF 6 49

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
aug-scaffold_4.g111 Neurospora discreta aug-scaffold_4.g111 N 0.000
Bcin06g06250 Botrytis cinerea Bcin06g06250 N 0.000
CFIO01_01363 Colletotrichum fioriniae CFIO01_01363 N 0.000
CGGC5_13848 Colletotrichum gloeosporioides CGGC5_13848 N 0.000
CH063_09851 Colletotrichum higginsianum CH063_09851 N 0.000
CHGG_01491 Chaetomium globosum CHGG_01491 N 0.000
Cob_08011 Colletotrichum orbiculare Cob_08011 N 0.000
CSUB01_03526 Colletotrichum sublineola CSUB01_03526 N 0.000
fgenesh1_pg.C_scaffold_4000277 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000277 N 0.000
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N 0.000
GLRG_04468 Colletotrichum graminicola GLRG_04468 N 0.000
HMPREF1541_05902 Cyphellophora europaea HMPREF1541_05902 N 0.000
MGG_01624 Magnaporthe oryzae MGG_01624 N 0.000
MYCTH_98955 Myceliophthora thermophila MYCTH_98955 N 0.000
NEUTE1DRAFT_134023 Neurospora tetrasperma NEUTE1DRAFT_134023 N 0.000
PODANS_1_7540 Podospora anserina PODANS_1_7540 N 0.000
PV04_01563 Capronia semiimmersa PV04_01563 N 0.000
PV06_03594 Exophiala oligosperma PV06_03594 N 0.000
SAPIO_CDS3171 Scedosporium apiospermum SAPIO_CDS3171 N 0.000
SBOR_0088 Sclerotinia borealis SBOR_0088 N 0.000
SMAC_04819 Sordaria macrospora SMAC_04819 N 0.000
THITE_19726 Thielavia terrestris THITE_19726 N 0.000
UCRPA7_3950 Togninia minima UCRPA7_3950 N 0.000
V499_01440 Pseudogymnoascus pannorum V499_01440 N 0.000