gene27341-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene27341-v1.0-hybrid T028312_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27341.1-v1.0-hybrid BED ZF 29 77

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02135 Capronia coronata A1O1_02135 N 0.000
A1O1_09140 Capronia coronata A1O1_09140 N 0.000
A1O5_08428 Cladophialophora psammophila A1O5_08428 N 0.000
A1O5_10714 Cladophialophora psammophila A1O5_10714 N 0.000
A1O7_08026 Cladophialophora yegresii A1O7_08026 N 0.000
A1O9_09960 Exophiala aquamarina A1O9_09960 N 0.000
ARB_01766 Arthroderma benhamiae ARB_01766 N 0.000
Bcin14g01990 Botrytis cinerea Bcin14g01990 N 0.000
BDDG_03994 Blastomyces dermatitidis BDDG_03994 N 0.000
EPUS_05889 Endocarpon pusillum EPUS_05889 N 0.000
G647_05584 Cladophialophora carrionii G647_05584 N 0.000
G647_06990 Cladophialophora carrionii G647_06990 N 0.000
H101_04894 Trichophyton interdigitale H101_04894 N 0.000
H102_08792 Trichophyton rubrum H102_08792 N 0.000
H105_08817 Trichophyton soudanense H105_08817 N 0.000
HCBG_02977 Histoplasma capsulatum HCBG_02977 N 0.000
HMPREF1541_03890 Cyphellophora europaea HMPREF1541_03890 N 0.000
M7I_5908 Glarea lozoyensis M7I_5908 N 0.000
MBM_09971 Marssonina brunnea MBM_09971 N 0.000
MCYG_02998 Arthroderma otae MCYG_02998 N 0.000
MCYG_02998 Microsporum canis MCYG_02998 N 0.000
MGYG_00173 Microsporum gypseum MGYG_00173 N 0.000
PABG_04230 Paracoccidioides brasiliensis PABG_04230 N 0.000
PV04_02964 Capronia semiimmersa PV04_02964 N 0.000
PV04_08544 Capronia semiimmersa PV04_08544 N 0.000
PV05_01157 Exophiala xenobiotica PV05_01157 N 0.000
PV05_10614 Exophiala xenobiotica PV05_10614 N 0.000
PV07_01329 Cladophialophora immunda PV07_01329 N 0.000
PV07_07329 Cladophialophora immunda PV07_07329 N 0.000
PV08_09443 Exophiala spinifera PV08_09443 N 0.000
PV10_03696 Exophiala mesophila PV10_03696 N 0.000
PV11_08912 Exophiala sideris PV11_08912 N 0.000
PVAR5_3926 Byssochlamys spectabilis PVAR5_3926 N 0.000
SBOR_8513 Sclerotinia borealis SBOR_8513 N 0.000
SS1G_10244 Sclerotinia sclerotiorum SS1G_10244 N 0.000
TEQG_08268 Trichophyton equinum TEQG_08268 N 0.000
TESG_07989 Trichophyton tonsurans TESG_07989 N 0.000
TRV_01335 Trichophyton verrucosum TRV_01335 N 0.000
UREG_04562 Uncinocarpus reesii UREG_04562 N 0.000
V499_05613 Pseudogymnoascus pannorum V499_05613 N 0.000
Z517_04760 Fonsecaea pedrosoi Z517_04760 N 0.000
Z517_10982 Fonsecaea pedrosoi Z517_10982 N 0.000
Z518_00552 Rhinocladiella mackenziei Z518_00552 N 0.000
Z519_05622 Cladophialophora bantiana Z519_05622 N 0.000
Z519_09902 Cladophialophora bantiana Z519_09902 N 0.000