CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab02036
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Ab02036
T028434_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab02036.1.p
BED ZF
5
51
DVVWEHGENLYPGWRCNYCRTQKGGGGATRLKQHLAGRGAEVVHCRN
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_06379
Cladophialophora psammophila
A1O5_06379
N
A1O7_00968
Cladophialophora yegresii
A1O7_00968
N
G647_01033
Cladophialophora carrionii
G647_01033
N
PV07_01921
Cladophialophora immunda
PV07_01921
N
Z517_07942
Fonsecaea pedrosoi
Z517_07942
N