CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba00900
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Ba00900
T028435_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba00900.1.p
BED ZF
26
74
DVGWEYGVLVDASNKDKVKCKLCDKEMRGGIHRLKEHLAHEGKNVKKCI
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG146844
Capitella teleta
CapteG146844
N
ENSTNIG00000017481
Tetraodon nigroviridis
ENSTNIG00000017481
N
HelroG69268
Helobdella robusta
HelroG69268
N
HMEL004935
Heliconius melpomene
HMEL004935
N
KGM_16549
Danaus plexippus
KGM_16549
N
L596_g18182
Steinernema carpocapsae
L596_g18182
N
L892_g25633
Steinernema scapterisci
L892_g25633
N
L893_g27549
Steinernema glaseri
L893_g27549
N
L898_g5090
Steinernema monticolum
L898_g5090
N
MCINX004970
Melitaea cinxia
MCINX004970
N
TriadG17654
Trichoplax adhaerens
TriadG17654
N