Pavir.Ba02216 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ba02216 T028437_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02216.1.p BED ZF 70 114
Pavir.Ba02216.2.p BED ZF 38 82

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00013p00046610 Amborella trichopoda AMTR_s00013p00046610 N
GSMUA_Achr6G16600_001 Musa acuminata GSMUA_Achr6G16600_001 N
OBART11G14300 Oryza barthii OBART11G14300 N
OGLUM11G13870 Oryza glumaepatula OGLUM11G13870 N
OLONG_002987 Oryza longistaminata OLONG_002987 N
OMERI11G11960 Oryza meridionalis OMERI11G11960 N
ORGLA11G0122000 Oryza glaberrima ORGLA11G0122000 N
OS11G0498400 Oryza sativa OS11G0498400 N
PGSC0003DMG400020210 Solanum tuberosum PGSC0003DMG400020210 N
Solyc02g094170.2 Solanum lycopersicum Solyc02g094170.2 N
Traes_3DS_4F293F5BA Triticum aestivum Traes_3DS_4F293F5BA N
VIT_14s0068g01930 Vitis vinifera VIT_14s0068g01930 N