Pavir.Ba02799 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ba02799 T028439_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02799.1.p BED ZF 28 74

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06449 Capronia coronata A1O1_06449 I
A1O3_05958 Capronia epimyces A1O3_05958 I
A1O7_06478 Cladophialophora yegresii A1O7_06478 N
A1O9_08054 Exophiala aquamarina A1O9_08054 I
AB07605.1 Alternaria brassicicola AB07605.1 I
ACRE_037310 Acremonium chrysogenum ACRE_037310 N
AUEXF2481DRAFT_66369 Aureobasidium subglaciale AUEXF2481DRAFT_66369 I
BAUCODRAFT_144662 Baudoinia compniacensis BAUCODRAFT_144662 I
Bcin11g01030 Botrytis cinerea Bcin11g01030 I
CSUB01_02601 Colletotrichum sublineola CSUB01_02601 N
DOTSEDRAFT_67939 Dothistroma septosporum DOTSEDRAFT_67939 I
e_gw1.1.1408.1 Mycosphaerella fijiensis e_gw1.1.1408.1 I
e_gw1.1.252.1 Mycosphaerella graminicola e_gw1.1.252.1 I
FFUJ_05867 Fusarium fujikuroi FFUJ_05867 N
FGRRES_08380 Fusarium graminearum FGRRES_08380 N
FPSE_08995 Fusarium pseudograminearum FPSE_08995 N
GMDG_01147 Pseudogymnoascus destructans GMDG_01147 I
HMPREF1541_00698 Cyphellophora europaea HMPREF1541_00698 I
LEMA_P051310.1 Leptosphaeria maculans LEMA_P051310.1 I
MANI_000154 Metarhizium anisopliae MANI_000154 N
MPH_05179 Macrophomina phaseolina MPH_05179 I
MYCFIDRAFT_125368 Pseudocercospora fijiensis MYCFIDRAFT_125368 I
Mycgr3G34788 Zymoseptoria tritici Mycgr3G34788 I
OCS_03412 Ophiocordyceps sinensis OCS_03412 N
PV04_06889 Capronia semiimmersa PV04_06889 I
PV05_09062 Exophiala xenobiotica PV05_09062 I
PV06_02578 Exophiala oligosperma PV06_02578 I
PV07_03725 Cladophialophora immunda PV07_03725 I
PV09_02460 Verruconis gallopava PV09_02460 I
PV11_06702 Exophiala sideris PV11_06702 I
SMAC_03256 Sordaria macrospora SMAC_03256 I
SNOG_07159 Stagonospora nodorum SNOG_07159 I
TRIREDRAFT_60627 Trichoderma reesei TRIREDRAFT_60627 N
UCRNP2_6034 Neofusicoccum parvum UCRNP2_6034 I
UV8b_836 Ustilaginoidea virens UV8b_836 N
V499_00565 Pseudogymnoascus pannorum V499_00565 I
X797_000669 Metarhizium robertsii X797_000669 N
Z518_02768 Rhinocladiella mackenziei Z518_02768 I
Z519_03994 Cladophialophora bantiana Z519_03994 N