Pavir.Ia03079 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ia03079 T028520_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03079.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCPOG00000020839 Cavia porcellus ENSCPOG00000020839 I
ENSETEG00000011024 Echinops telfairi ENSETEG00000011024 I
ENSLAFG00000007964 Loxodonta africana ENSLAFG00000007964 I
ENSLOCG00000017507 Lepisosteus oculatus ENSLOCG00000017507 I
ENSNLEG00000003823 Nomascus leucogenys ENSNLEG00000003823 I
ENSOANG00000002423 Ornithorhynchus anatinus ENSOANG00000002423 I
ENSSHAG00000004906 Sarcophilus harrisii ENSSHAG00000004906 I
ENSSTOG00000027713 Ictidomys tridecemlineatus ENSSTOG00000027713 I
Ogr17935 Ophisaurus gracilis Ogr17935 I
olig1 Xenopus tropicalis XB-GENE-478472 I
OLIG1 Bos taurus ENSBTAG00000037547 I
OLIG1 Vicugna pacos ENSVPAG00000005098 I
OLIG1 Sus scrofa ENSSSCG00000012040 I
Olig1 Rattus norvegicus ENSRNOG00000028648 I
OLIG1 Pteropus vampyrus ENSPVAG00000001702 I
OLIG1 Pan troglodytes ENSPTRG00000031440 I
OLIG1 Ochotona princeps ENSOPRG00000007722 I
OLIG1 Otolemur garnettii ENSOGAG00000033584 I
OLIG1 Oryctolagus cuniculus ENSOCUG00000027389 I
Olig1 Mus musculus ENSMUSG00000046160 I
OLIG1 Monodelphis domestica ENSMODG00000021070 I
OLIG1 Macaca mulatta ENSMMUG00000001558 I
OLIG1 Homo sapiens ENSG00000184221 D
OLIG1 Dasypus novemcinctus ENSDNOG00000042196 I
OLIG1 Canis familiaris ENSCAFG00000031953 I
OLIG2 Callithrix jacchus ENSCJAG00000009439 I
Pvit_10684 Pogona vitticeps Pvit_10684 I