Pavir.J00513 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J00513 T028530_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00513.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_078720 Acremonium chrysogenum ACRE_078720 N
CADANGAG00011028 Aspergillus niger CADANGAG00011028 N
CH063_08271 Colletotrichum higginsianum CH063_08271 N
CMQ_1168 Grosmannia clavigera CMQ_1168 N
CSUB01_01897 Colletotrichum sublineola CSUB01_01897 N
CTHT_0034060 Chaetomium thermophilum CTHT_0034060 N
F503_04971 Ophiostoma piceae uamh F503_04971 N
FFUJ_12262 Fusarium fujikuroi FFUJ_12262 N
GSTUM_00009064001 Tuber melanosporum GSTUM_00009064001 N
H101_00195 Trichophyton interdigitale H101_00195 N
HCBG_07168 Histoplasma capsulatum HCBG_07168 N
LEMA_P057910.1 Leptosphaeria maculans LEMA_P057910.1 N
MCYG_02571 Microsporum canis MCYG_02571 N
MCYG_02571 Arthroderma otae MCYG_02571 N
NEUTE1DRAFT_145502 Neurospora tetrasperma NEUTE1DRAFT_145502 N
OIDMADRAFT_72735 Oidiodendron maius OIDMADRAFT_72735 N
PDIP_15270 Penicillium digitatum PDIP_15270 N
PEX1_055770 Penicillium expansum PEX1_055770 N
PV11_07762 Exophiala sideris PV11_07762 N
S40285_04014 Stachybotrys chlorohalonata S40285_04014 N
S40288_02610 Stachybotrys chartarum S40288_02610 N
SETTUDRAFT_155346 Setosphaeria turcica SETTUDRAFT_155346 N
SNOG_01738 Stagonospora nodorum SNOG_01738 N
SNOG_12765 Phaeosphaeria nodorum SNOG_12765 N
TEQG_05685 Trichophyton equinum TEQG_05685 N
TESG_07096 Trichophyton tonsurans TESG_07096 N
U727_00430311441 Penicillium solitum U727_00430311441 N
UV8b_3206 Ustilaginoidea virens UV8b_3206 N
V499_01312 Pseudogymnoascus pannorum V499_01312 N
VDAG_09033 Verticillium dahliae VDAG_09033 N
VDBG_04344 Verticillium albo atrum VDBG_04344 N
VDBG_04344 Verticillium alfalfae VDBG_04344 N
W97_05320 Coniosporium apollinis W97_05320 N