CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J19980
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J19980
T028595_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J19980.1.p
BED ZF
59
114
SKVWDEYEKLFKQINGKTVRYGAKCLHCKSILSGFSSSGTGHLSRHLLTCRSKKKK
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001009801
Angiostrongylus costaricensis
ACOC_0001009801
I
0.000
ANCDUO_16703
Ancylostoma duodenale
ANCDUO_16703
N
0.000
Bm5392
Brugia malayi
Bm5392
I
0.000
daf-16
Caenorhabditis elegans
WBGene00000912
D
0.000
NECAME_10046
Necator americanus
NECAME_10046
N
0.000
TCNE_0000984601
Toxocara canis
TCNE_0000984601
I
0.000
TELCIR_03821
Teladorsagia circumcincta
TELCIR_03821
N
0.000