CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPLIN_000010400
(
Globodera pallida
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPLIN_000010400
T029338_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000010400
BED ZF
130
174
HPVWTFFQDLRDSNGIGGVSCMHCDWTGDDRSPNNLKTHLKRCHD
Links
Other
BED ZF
family TFs
Other
Globodera pallida
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR12G16320
Leersia perrieri
LPERR12G16320
N
ONIVA02G30390
Oryza nivara
ONIVA02G30390
N
ONIVA05G13010
Oryza nivara
ONIVA05G13010
N
ONIVA08G21440
Oryza nivara
ONIVA08G21440
N
ORGLA02G0147100
Oryza glaberrima
ORGLA02G0147100
N
ORUFI09G07100
Oryza rufipogon
ORUFI09G07100
N
OS05G0345900
Oryza sativa
OS05G0345900
N