CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01489000
(
Haemonchus contortus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
HCOI01489000
T029374_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01489000.t1
BED ZF
163
203
HPVWMFFKDLEDRMVGCINCSFRTGSAFSTNLKMHLKAHHK
HCOI01489000.t2
BED ZF
171
211
HPVWMFFKDLEDRMVGCINCSFRTGSAFSTNLKMHLKAHHK
HCOI01489000.t3
BED ZF
163
203
HPVWMFFKDLEDRMVGCINCSFRTGSAFSTNLKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Haemonchus contortus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_16865
Ancylostoma caninum
ANCCAN_16865
N
0.976
ANCCEY_01034
Ancylostoma ceylanicum
ANCCEY_01034
N
0.976
NECAME_15822
Necator americanus
NECAME_15822
N
0.976
scaffold642-EXSNAP2012.19
Pristionchus exspectatus
scaffold642-EXSNAP2012.19
N
0.976
TELCIR_00911
Teladorsagia circumcincta
TELCIR_00911
N
1.000
TELCIR_21242
Teladorsagia circumcincta
TELCIR_21242
N
1.000