CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0000670100
(
Strongyloides papillosus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
SPAL_0000670100
T029707_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0000670100.1
BED ZF
117
162
HAVWNFFKDLKDVDPEANGAMCLHCDWKGIEKGPNNLKIHLKKAHT
Links
Other
BED ZF
family TFs
Other
Strongyloides papillosus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035015
Oryza indica
BGIOSGA035015
N
OBART11G06850
Oryza barthii
OBART11G06850
N
OGLUM11G06580
Oryza glumaepatula
OGLUM11G06580
N
OLONG_001248
Oryza longistaminata
OLONG_001248
N
OMERI11G05850
Oryza meridionalis
OMERI11G05850
N
ONIVA11G06910
Oryza nivara
ONIVA11G06910
N
ORGLA11G0062700
Oryza glaberrima
ORGLA11G0062700
N
ORUFI11G07090
Oryza rufipogon
ORUFI11G07090
N
OS11G0218000
Oryza sativa
OS11G0218000
N