VDBG_06134 (Verticillium albo atrum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 VDBG_06134 T030054_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02957
M01763_2.00 		Neurospora crassa
NMDCGTGBN
NVCACGHKN		 PBM
Weirauch et al.(2014)
pTH8839 		0.914 0.936
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_06134T0 bHLH 211 257

Links

Other bHLH family TFs
Other Verticillium albo atrum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011276 Ricinus communis 30190.m011276 I
Bo1g035810 Brassica oleracea Bo1g035810 I
Bo3g165850 Brassica oleracea Bo3g165850 I
Bo7g088570 Brassica oleracea Bo7g088570 I
Bo7g108870 Brassica oleracea Bo7g108870 I
Bostr.7867s0150 Boechera stricta Bostr.7867s0150 I
Bra013708 Brassica rapa Bra013708 I
Bra019297 Brassica rapa Bra019297 I
Bra020814 Brassica rapa Bra020814 I
Cagra.1226s0001 Capsella grandiflora Cagra.1226s0001 I
Carubv10005155m.g Capsella rubella Carubv10005155m.g I
cassava39274.m1 Manihot esculenta cassava39274.m1 I
Ca_05782 Cicer arietinum Ca_05782 I
Ca_21883 Cicer arietinum Ca_21883 I
chr4.CM0501.200.nd Lotus japonicus chr4.CM0501.200.nd I
Ciclev10024061m.g Citrus clementina Ciclev10024061m.g I
Cucsa.106960 Cucumis sativus Cucsa.106960 I
Eucgr.D02324 Eucalyptus grandis Eucgr.D02324 I
evm.TU.supercontig_180.9 Carica papaya evm.TU.supercontig_180.9 I
gene31843-v1.0-hybrid Fragaria vesca gene31843-v1.0-hybrid I
GLYMA01G43130 Glycine max GLYMA01G43130 I
GLYMA05G37390 Glycine max GLYMA05G37390 I
GLYMA08G02160 Glycine max GLYMA08G02160 I
Gorai.008G250300 Gossypium raimondii Gorai.008G250300 I
GSMUA_Achr3G15690_001 Musa acuminata GSMUA_Achr3G15690_001 I
Lus10032303.g Linum usitatissimum Lus10032303.g I
MDP0000247896 Malus domestica MDP0000247896 I
MTR_8g098945 Medicago truncatula MTR_8g098945 I
orange1.1g021896m.g Citrus sinensis orange1.1g021896m.g I
PGSC0003DMG400012318 Solanum tuberosum PGSC0003DMG400012318 I
PK29806.1 Cannabis sativa PK29806.1 I
Pm023948 Prunus mume Pm023948 I
POPTR_0001s09900 Populus trichocarpa POPTR_0001s09900 I
POPTR_0003s13250 Populus trichocarpa POPTR_0003s13250 I
PRUPE_ppa025013mg Prunus persica PRUPE_ppa025013mg I
SapurV1A.0098s0400 Salix purpurea SapurV1A.0098s0400 I
SapurV1A.0119s0210 Salix purpurea SapurV1A.0119s0210 I
Solyc08g081610.2 Solanum lycopersicum Solyc08g081610.2 I
TCM_016343 Theobroma cacao TCM_016343 I
Thhalv10025799m.g Eutrema salsugineum Thhalv10025799m.g I
WRKY29 Arabidopsis thaliana AT4G23550 D
WRKY29 Arabidopsis lyrata fgenesh2_kg.7__1947__AT4G23550.1 I
WRKY29 Vitis vinifera VIT_02s0025g00420 I