CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIBMGA010353
(
Bombyx mori
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BGIBMGA010353
T030828_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.903
0.885
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.903
0.885
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.890
0.788
Tfap4
M01717_2.00
Mus musculus
VHCABVYGB
VCRBVTGDB
PBM
Weirauch et al.(2014)
pTH5067
0.854
0.846
TFAP4
M02776_2.00
Homo sapiens
AWCAGCTGWY
RWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_1
0.854
0.846
TFAP4
M02777_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Jolma et al.(2013)
TFAP4_2
0.854
0.846
TFAP4
M04066_2.00
Homo sapiens
VHCAKVTGDB
VHCABMTGDB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1
0.854
0.846
TFAP4
M04067_2.00
Homo sapiens
VWCAGCTGWB
VWCAGCTGWB
SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2
0.854
0.846
TFAP4
M04070_2.00
Homo sapiens
RHCAYVTGDB
VHCABRTGDY
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1
0.854
0.846
TFAP4
M04071_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2
0.854
0.846
TFAP4
M08712_2.00
Homo sapiens
VMNCAGCTGR
YCAGCTGNKB
Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A
0.854
0.846
TFAP4
M09453_2.00
Homo sapiens
NVHCAGCTGD
HCAGCTGDBN
Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738
0.854
0.846
TFAP4
M09802_2.00
Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK
Transfac
Matys et al.(2006)
V$AP4_01
0.854
0.846
TFAP4
M09803_2.00
Homo sapiens
NNSAGCTGHB
VDCAGCTSNN
Transfac
Matys et al.(2006)
V$AP4_Q5
0.854
0.846
TFAP4
M09804_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_01
0.854
0.846
TFAP4
M09805_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AP4_Q6_02
0.854
0.846
TFAP4
M09806_2.00
Homo sapiens
NVCAGCTGHB
VDCAGCTGBN
Transfac
Matys et al.(2006)
V$AP4_Q6
0.854
0.846
TFAP4
M04068_2.00
Homo sapiens
DHCABMTGDN
NHCAKVTGDH
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1
0.854
0.846
TFAP4
M04069_2.00
Homo sapiens
AWCAGCTGWT
AWCAGCTGWT
SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2
0.854
0.846
TFAP4
M04072_2.00
Homo sapiens
VHCABVTGDB
VHCABVTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1
0.854
0.846
TFAP4
M04073_2.00
Homo sapiens
VHCAGCTGDB
VHCAGCTGDB
SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2
0.854
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA010353-TA
bHLH
8
59
RREIANSNERRRMQSINAGFQALRTLLPRHEGEKLSKAAILQQTAEYIYNLE
Links
Other
bHLH
family TFs
Other
Bombyx mori
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191136
Agaricus bisporus
AGABI2DRAFT_191136
N
0.000
BN946_scf184939.g72
Trametes cinnabarina
BN946_scf184939.g72
N
0.000
CC1G_07059
Coprinopsis cinerea
CC1G_07059
N
0.000
CY34DRAFT_12675
Suillus luteus
CY34DRAFT_12675
N
0.000
fgenesh1_pg.C_scaffold_4000174
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000174
N
0.000
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.000
FOMPIDRAFT_132799
Fomitopsis pinicola
FOMPIDRAFT_132799
N
0.000
GALMADRAFT_244440
Galerina marginata
GALMADRAFT_244440
N
0.000
GLOTRDRAFT_78300
Gloeophyllum trabeum
GLOTRDRAFT_78300
N
0.000
HETIRDRAFT_439748
Heterobasidion irregulare
HETIRDRAFT_439748
N
0.000
JAAARDRAFT_194246
Jaapia argillacea
JAAARDRAFT_194246
N
0.000
K443DRAFT_670658
Laccaria amethystina
K443DRAFT_670658
N
0.000
LACBIDRAFT_296989
Laccaria bicolor
LACBIDRAFT_296989
N
0.000
M378DRAFT_463994
Amanita muscaria
M378DRAFT_463994
I
0.000
M378DRAFT_9324
Amanita muscaria
M378DRAFT_9324
N
0.000
M413DRAFT_29155
Hebeloma cylindrosporum
M413DRAFT_29155
N
0.000
Moror_12870
Moniliophthora roreri
Moror_12870
N
0.000
PAXINDRAFT_170453
Paxillus involutus
PAXINDRAFT_170453
N
0.000
PAXRUDRAFT_822144
Paxillus rubicundulus
PAXRUDRAFT_822144
N
0.000
PHLGIDRAFT_125548
Phlebiopsis gigantea
PHLGIDRAFT_125548
N
0.000
PILCRDRAFT_401124
Piloderma croceum
PILCRDRAFT_401124
N
0.000
PILCRDRAFT_819471
Piloderma croceum
PILCRDRAFT_819471
N
0.000
PISMIDRAFT_112540
Pisolithus microcarpus
PISMIDRAFT_112540
N
0.000
PLEOSDRAFT_174562
Pleurotus ostreatus
PLEOSDRAFT_174562
N
0.000
SCHCODRAFT_76401
Schizophyllum commune
SCHCODRAFT_76401
N
0.000
SEPMUDRAFT_148959
Sphaerulina musiva
SEPMUDRAFT_148959
I
0.000
SERLA73DRAFT_181394
Serpula lacrymans
SERLA73DRAFT_181394
N
0.000