Bo6g024810 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo6g024810 T031216_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH122
M06724_2.00 		Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN		 Dap-seq
OMalley et al.(2016)
bHLH122_col100_a 		0.914 1.000
BHLH122
M06725_2.00 		Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a 		0.914 1.000
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.867 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g024810.1 bHLH 296 346

Links

Other bHLH family TFs
Other Brassica oleracea TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009899 Calypte anna Aan_R009899 I
Afo_R012285 Aptenodytes forsteri Afo_R012285 I
Alligator_sinensis_CCG000944.1 Alligator sinensis Alligator_sinensis_CCG000944.1 I
Aqu1.221488 Amphimedon queenslandica Aqu1.221488 I
BGLB006516 Biomphalaria glabrata BGLB006516 I
BGLB012621 Biomphalaria glabrata BGLB012621 I
Brh_R002183 Buceros rhinoceros Brh_R002183 I
CAC12963 Xenopus laevis CAC12963 I
CapteG131123 Capitella teleta CapteG131123 N
CapteG199610 Capitella teleta CapteG199610 I
CBG02936 Caenorhabditis briggsae CBG02936 I
CBN23382 Caenorhabditis brenneri CBN23382 I
CJA16219 Caenorhabditis japonica CJA16219 I
CRE02153 Caenorhabditis remanei CRE02153 I
DAPPUDRAFT_8599 Daphnia pulex DAPPUDRAFT_8599 I
ECANG7_00391 Echinococcus canadensis ECANG7_00391 I
EmuJ_000628700 Echinococcus multilocularis EmuJ_000628700 I
ENSAPLG00000007505 Anas platyrhynchos ENSAPLG00000007505 I
ENSFALG00000013960 Ficedula albicollis ENSFALG00000013960 I
ENSGACG00000011599 Gasterosteus aculeatus ENSGACG00000011599 I
ENSGALG00000024294 Gallus gallus ENSGALG00000024294 I
ENSLACG00000008269 Latimeria chalumnae ENSLACG00000008269 I
ENSMGAG00000001726 Meleagris gallopavo ENSMGAG00000001726 I
ENSOANG00000007002 Ornithorhynchus anatinus ENSOANG00000007002 I
ENSPSIG00000004256 Pelodiscus sinensis ENSPSIG00000004256 I
ENSTGUG00000008530 Taeniopygia guttata ENSTGUG00000008530 I
estExt_fgenesh2_kg.C_2440002 Branchiostoma floridae estExt_fgenesh2_kg.C_2440002 I
fgenesh2_pm.scaffold_42000007 Branchiostoma floridae fgenesh2_pm.scaffold_42000007 I
foxd-a/b Ciona intestinalis ENSCING00000023594 I
foxd1.L Xenopus laevis XB-GENE-865762 I
foxd2.S Xenopus laevis XB-GENE-865311 I
foxd3 Gasterosteus aculeatus ENSGACG00000006933 I
foxd3.L Xenopus laevis XB-GENE-865691 I
foxd3.S Xenopus laevis XB-GENE-6252892 I
foxe1 Xenopus tropicalis XB-GENE-478544 I
foxe1.L Xenopus laevis XB-GENE-865189 I
Gfo_R007083 Geospiza fortis Gfo_R007083 I
LotgiG137594 Lottia gigantea LotgiG137594 I
LotgiG99760 Lottia gigantea LotgiG99760 I
NEMVEDRAFT_v1g110212 Nematostella vectensis NEMVEDRAFT_v1g110212 N
nRc.2.0.1.g21816 Romanomermis culicivorax nRc.2.0.1.g21816 I
Ocbimv22021452m.g Octopus bimaculoides Ocbimv22021452m.g I
Sakowv30008279m.g Saccoglossus kowalevskii Sakowv30008279m.g I
Sakowv30020443m.g Saccoglossus kowalevskii Sakowv30020443m.g N
SMAR004878 Strigamia maritima SMAR004878 I
SMU15000028 Schmidtea mediterranea SMU15000028 I
SPU_014418 Strongylocentrotus purpuratus SPU_014418 I
SPU_027648 Strongylocentrotus purpuratus SPU_027648 I
Tal_R011333 Tyto alba Tal_R011333 I
TASK_0000473201 Taenia asiatica TASK_0000473201 I
TsM_000900700 Taenia solium TsM_000900700 I
TTAC_0000791201 Hydatigera taeniaeformis TTAC_0000791201 I
unc-130 Caenorhabditis elegans WBGene00006853 I