CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G57800
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI2G57800
T031648_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.861
0.882
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G57800.1
bHLH
302
352
ATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQ
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CTHT_0038660
Chaetomium thermophilum
CTHT_0038660
N
estExt_Genewise1Plus.C_120364
Neurospora discreta
estExt_Genewise1Plus.C_120364
N
fsd-1
Neurospora crassa
NCU09915
N
GLRG_06073
Colletotrichum graminicola
GLRG_06073
N
MYCTH_37566
Myceliophthora thermophila
MYCTH_37566
N
PODANS_1_22920
Podospora anserina
PODANS_1_22920
N
SMAC_01666
Sordaria macrospora
SMAC_01666
N
THITE_2055949
Thielavia terrestris
THITE_2055949
N
VDAG_00592
Verticillium dahliae
VDAG_00592
N
VDBG_00980
Verticillium albo atrum
VDBG_00980
N
VDBG_00980
Verticillium alfalfae
VDBG_00980
N