CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROD6
(
Anolis carolinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSACAG00000009699
T032714_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.894
0.923
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.894
0.923
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.894
0.923
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.894
0.923
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.894
0.923
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.894
0.923
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.894
0.923
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.894
0.923
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.859
0.923
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.859
0.923
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.859
0.923
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.859
0.923
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.859
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000009487
bHLH
95
147
RRQEANTRERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Anolis carolinensis
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_080110
Acremonium chrysogenum
ACRE_080110
I
0.000
BBA_00844
Beauveria bassiana
BBA_00844
I
0.000
Bcin02g03240
Botrytis cinerea
Bcin02g03240
I
0.000
BGHDH14_bgh06583
Blumeria graminis
BGHDH14_bgh06583
I
0.000
CCM_05618
Cordyceps militaris
CCM_05618
I
0.000
CFIO01_02423
Colletotrichum fioriniae
CFIO01_02423
I
0.000
CH063_08904
Colletotrichum higginsianum
CH063_08904
I
0.000
CHGG_02493
Chaetomium globosum
CHGG_02493
I
0.000
CMQ_6262
Grosmannia clavigera
CMQ_6262
I
0.000
Cob_03179
Colletotrichum orbiculare
Cob_03179
I
0.000
CPUR_06716
Claviceps purpurea
CPUR_06716
I
0.000
CSUB01_04857
Colletotrichum sublineola
CSUB01_04857
I
0.000
estExt_fgenesh2_pg.C_10626
Neurospora discreta
estExt_fgenesh2_pg.C_10626
I
0.000
estExt_Genewise1Plus.C_sca_6_chr9_2_00224
Nectria haematococca
estExt_Genewise1Plus.C_sca_6_chr9_2_00224
I
0.000
F503_08286
Ophiostoma piceae uamh
F503_08286
I
0.000
FFUJ_02554
Fusarium fujikuroi
FFUJ_02554
I
0.000
FGRRES_07368
Fusarium graminearum
FGRRES_07368
I
0.000
FOXG_01519
Fusarium oxysporum
FOXG_01519
I
0.000
FOXG_16654
Fusarium oxysporum
FOXG_16654
I
0.000
FOXG_16719
Fusarium oxysporum
FOXG_16719
I
0.000
FPSE_04183
Fusarium pseudograminearum
FPSE_04183
I
0.000
FVEG_07882
Fusarium verticillioides
FVEG_07882
I
0.000
GGTG_00491
Gaeumannomyces graminis
GGTG_00491
I
0.000
GLRG_03014
Colletotrichum graminicola
GLRG_03014
I
0.000
GMDG_03522
Pseudogymnoascus destructans
GMDG_03522
I
0.000
HMPREF1624_00394
Sporothrix schenckii
HMPREF1624_00394
I
0.000
MAJ_01995
Metarhizium majus
MAJ_01995
I
0.000
MANI_016433
Metarhizium anisopliae
MANI_016433
I
0.000
MBM_08507
Marssonina brunnea
MBM_08507
I
0.000
MBR_03822
Metarhizium brunneum
MBR_03822
I
0.000
MGG_08185
Magnaporthe oryzae
MGG_08185
I
0.000
MGU_05879
Metarhizium guizhouense
MGU_05879
I
0.000
MYCTH_2300984
Myceliophthora thermophila
MYCTH_2300984
I
0.000
NCU01386
Neurospora crassa
NCU01386
D
0.000
NechaG71721
Fusarium solani
NechaG71721
I
0.000
NEUTE1DRAFT_119830
Neurospora tetrasperma
NEUTE1DRAFT_119830
I
0.000
OCS_04243
Ophiocordyceps sinensis
OCS_04243
I
0.000
OIDMADRAFT_165781
Oidiodendron maius
OIDMADRAFT_165781
I
0.000
PFICI_07768
Pestalotiopsis fici
PFICI_07768
I
0.000
S40285_07444
Stachybotrys chlorohalonata
S40285_07444
I
0.000
S40288_01221
Stachybotrys chartarum
S40288_01221
I
0.000
SBOR_3407
Sclerotinia borealis
SBOR_3407
I
0.000
SMAC_08362
Sordaria macrospora
SMAC_08362
I
0.000
SPBR_06705
Sporothrix brasiliensis
SPBR_06705
I
0.000
SS1G_01733
Sclerotinia sclerotiorum
SS1G_01733
I
0.000
TRIATDRAFT_53110
Trichoderma atroviride
TRIATDRAFT_53110
I
0.000
TRIVIDRAFT_33856
Trichoderma virens
TRIVIDRAFT_33856
N
0.000
UV8b_2421
Ustilaginoidea virens
UV8b_2421
I
0.000
V499_06325
Pseudogymnoascus pannorum
V499_06325
I
0.000
VDAG_08406
Verticillium dahliae
VDAG_08406
I
0.000
VHEMI01378
Torrubiella hemipterigena
VHEMI01378
I
0.000
X797_006189
Metarhizium robertsii
X797_006189
I
0.000
X797_010922
Metarhizium robertsii
X797_010922
I
0.000
X797_011329
Metarhizium robertsii
X797_011329
I
0.000
X797_012204
Metarhizium robertsii
X797_012204
I
0.000