CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000014944
(
Astyanax mexicanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSAMXG00000014944
T032923_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.894
0.942
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.894
0.942
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.894
0.942
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.894
0.942
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.894
0.942
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.894
0.942
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.894
0.942
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.894
0.942
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.859
0.904
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.859
0.904
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.859
0.904
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.859
0.904
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.859
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000015378
bHLH
97
149
RRMKANARERNRMHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Astyanax mexicanus
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03114
Capronia coronata
A1O1_03114
I
0.000
A1O3_01974
Capronia epimyces
A1O3_01974
I
0.000
A1O5_03439
Cladophialophora psammophila
A1O5_03439
I
0.000
A1O7_04367
Cladophialophora yegresii
A1O7_04367
I
0.000
A1O9_00612
Exophiala aquamarina
A1O9_00612
I
0.000
ACLA_039140
Aspergillus clavatus
CADACLAG00003633
N
0.000
AFUA_3G11250
Aspergillus fumigatus
CADAFUAG00005698
I
0.000
ANIA_04873
Aspergillus nidulans
CADANIAG00005532
I
0.000
ARB_05394
Arthroderma benhamiae
ARB_05394
N
0.000
ATEG_04658
Aspergillus terreus
CADATEAG00009335
I
0.000
Bcin02g07540
Botrytis cinerea
Bcin02g07540
I
0.000
CADAFLAG00002515
Aspergillus flavus
CADAFLAG00002515
I
0.000
CADANGAG00002216
Aspergillus niger
CADANGAG00002216
I
0.000
CADAORAG00001279
Aspergillus oryzae
CADAORAG00001279
I
0.000
CIMG_03820
Coccidioides immitis
CIMG_03820
N
0.000
CPC735_005020
Coccidioides posadasii
CPC735_005020
N
0.000
CTHT_0018750
Chaetomium thermophilum
CTHT_0018750
I
0.000
EPUS_07921
Endocarpon pusillum
EPUS_07921
I
0.000
estExt_fgenesh2_pg.C_80281
Neurospora discreta
estExt_fgenesh2_pg.C_80281
I
0.000
EURHEDRAFT_515807
Aspergillus ruber
EURHEDRAFT_515807
I
0.000
e_gw1.00866.172.1
Aspergillus carbonarius
e_gw1.00866.172.1
I
0.000
F503_03781
Ophiostoma piceae uamh
F503_03781
I
0.000
G647_04328
Cladophialophora carrionii
G647_04328
I
0.000
GMDG_06980
Pseudogymnoascus destructans
GMDG_06980
I
0.000
GSTUM_00007462001
Tuber melanosporum
GSTUM_00007462001
I
0.000
H101_04757
Trichophyton interdigitale
H101_04757
N
0.000
H102_07608
Trichophyton rubrum
H102_07608
N
0.000
H105_07634
Trichophyton soudanense
H105_07634
N
0.000
HMPREF1120_06603
Exophiala dermatitidis
HMPREF1120_06603
I
0.000
HMPREF1541_09309
Cyphellophora europaea
HMPREF1541_09309
I
0.000
MBM_04034
Marssonina brunnea
MBM_04034
I
0.000
MCYG_00678
Microsporum canis
MCYG_00678
N
0.000
MCYG_00678
Arthroderma otae
MCYG_00678
N
0.000
MGYG_01294
Microsporum gypseum
MGYG_01294
N
0.000
NCU06907
Neurospora crassa
NCU06907
D
0.000
NEUTE1DRAFT_130988
Neurospora tetrasperma
NEUTE1DRAFT_130988
I
0.000
NFIA_066040
Neosartorya fischeri
CADNFIAG00006379
I
0.000
OIDMADRAFT_103771
Oidiodendron maius
OIDMADRAFT_103771
I
0.000
PDIP_29800
Penicillium digitatum
PDIP_29800
N
0.000
PMAA_023500
Penicillium marneffei
PMAA_023500
N
0.000
PMAA_023500
Talaromyces marneffei
PMAA_023500
N
0.000
PV04_04915
Capronia semiimmersa
PV04_04915
I
0.000
PV06_04279
Exophiala oligosperma
PV06_04279
I
0.000
PV07_07651
Cladophialophora immunda
PV07_07651
I
0.000
PV08_10349
Exophiala spinifera
PV08_10349
I
0.000
PV10_00143
Exophiala mesophila
PV10_00143
I
0.000
PV11_04194
Exophiala sideris
PV11_04194
I
0.000
PVAR5_7714
Byssochlamys spectabilis
PVAR5_7714
I
0.000
SBOR_8019
Sclerotinia borealis
SBOR_8019
I
0.000
SMAC_05878
Sordaria macrospora
SMAC_05878
I
0.000
TEQG_05544
Trichophyton equinum
TEQG_05544
N
0.000
TESG_05703
Trichophyton tonsurans
TESG_05703
N
0.000
THITE_2117700
Thielavia terrestris
THITE_2117700
I
0.000
TRV_03376
Trichophyton verrucosum
TRV_03376
N
0.000
TSTA_031880
Talaromyces stipitatus
TSTA_031880
N
0.000
V499_09093
Pseudogymnoascus pannorum
V499_09093
I
0.000
Z517_12080
Fonsecaea pedrosoi
Z517_12080
I
0.000
Z518_09813
Rhinocladiella mackenziei
Z518_09813
I
0.000
Z519_10261
Cladophialophora bantiana
Z519_10261
I
0.000