TCF12 (Choloepus hoffmanni)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCHOG00000003168 T033233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000002821 bHLH 574 627

Links

Other bHLH family TFs
Other Choloepus hoffmanni TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08374 Capronia coronata A1O1_08374 N
A1O3_03378 Capronia epimyces A1O3_03378 N
A1O5_11351 Cladophialophora psammophila A1O5_11351 N
A1O7_03452 Cladophialophora yegresii A1O7_03452 N
A1O9_03418 Exophiala aquamarina A1O9_03418 N
ACLA_097550 Aspergillus clavatus CADACLAG00008965 N
AFUA_6G02870 Aspergillus fumigatus CADAFUAG00000624 N
ANIA_11119 Aspergillus nidulans CADANIAG00006293 N
ARB_07658 Arthroderma benhamiae ARB_07658 N
BDDG_05974 Blastomyces dermatitidis BDDG_05974 N
CADAFLAG00008853 Aspergillus flavus CADAFLAG00008853 N
CADANGAG00010192 Aspergillus niger CADANGAG00010192 N
CHGG_01176 Chaetomium globosum CHGG_01176 N
CIMG_10073 Coccidioides immitis CIMG_10073 N
CPC735_012090 Coccidioides posadasii CPC735_012090 N
CTHT_0055930 Chaetomium thermophilum CTHT_0055930 N
EURHEDRAFT_553123 Aspergillus ruber EURHEDRAFT_553123 N
e_gw1.00855.141.1 Aspergillus carbonarius e_gw1.00855.141.1 N
G647_04932 Cladophialophora carrionii G647_04932 N
H102_08731 Trichophyton rubrum H102_08731 N
H105_08757 Trichophyton soudanense H105_08757 N
HMPREF1120_05438 Exophiala dermatitidis HMPREF1120_05438 N
HMPREF1541_04413 Cyphellophora europaea HMPREF1541_04413 N
MCYG_03062 Microsporum canis MCYG_03062 N
MGYG_00234 Microsporum gypseum MGYG_00234 N
MYCTH_2131805 Myceliophthora thermophila MYCTH_2131805 N
NCU00753 Neurospora crassa NCU00753 N
NEUTE1DRAFT_89832 Neurospora tetrasperma NEUTE1DRAFT_89832 N
NFIA_049210 Neosartorya fischeri CADNFIAG00004525 N
PAAG_04524 Paracoccidioides sp lutzii PAAG_04524 N
PABG_04302 Paracoccidioides brasiliensis PABG_04302 N
Pc22g23220 Penicillium chrysogenum Pc22g23220 N
PCH_Pc22g23220 Penicillium rubens PCH_Pc22g23220 N
PDE_03456 Penicillium oxalicum PDE_03456 N
PMAA_092890 Penicillium marneffei PMAA_092890 N
PMAA_092890 Talaromyces marneffei PMAA_092890 N
PV04_03653 Capronia semiimmersa PV04_03653 N
PV05_05744 Exophiala xenobiotica PV05_05744 N
PV06_02763 Exophiala oligosperma PV06_02763 N
PV07_06526 Cladophialophora immunda PV07_06526 N
PV08_11102 Exophiala spinifera PV08_11102 N
PV10_05581 Exophiala mesophila PV10_05581 N
PV11_01133 Exophiala sideris PV11_01133 N
PVAR5_0184 Byssochlamys spectabilis PVAR5_0184 N
SMAC_01437 Sordaria macrospora SMAC_01437 N
TEQG_06448 Trichophyton equinum TEQG_06448 N
TESG_00833 Trichophyton tonsurans TESG_00833 N
THITE_2122361 Thielavia terrestris THITE_2122361 N
TSTA_048670 Talaromyces stipitatus TSTA_048670 N
Z517_10278 Fonsecaea pedrosoi Z517_10278 N
Z519_02108 Cladophialophora bantiana Z519_02108 N