CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000003326
(
Cavia porcellus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSCPOG00000003326
T033398_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYC
M08054_2.00
Homo sapiens
NNSCACGTGGNN
NNCCACGTGSNN
ChIP-seq
Mathelier et al.(2014)
MA0147.3
0.898
0.932
MYC
M07799_2.00
Homo sapiens
VNSCACGTGG
CCACGTGSNB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CMYC_Stanford
0.898
0.932
MYC
M07800_2.00
Homo sapiens
NNSCACGTGGB
VCCACGTGSNN
ChIP-seq
Gerstein et al.(2012)
HepG2_CMYC_UT-A
0.898
0.932
MYC
M07801_2.00
Homo sapiens
VNVCACGTGGN
NCCACGTGBNB
ChIP-seq
Gerstein et al.(2012)
K562_CMYC_Stanford
0.898
0.932
MYC
M07802_2.00
Homo sapiens
VSCRCGTGBNB
VNVCACGYGSB
ChIP-seq
Gerstein et al.(2012)
K562_CMYC_UT-A
0.898
0.932
MYC
M07803_2.00
Homo sapiens
CACGTGSH
DSCACGTG
ChIP-seq
Gerstein et al.(2012)
MCF-7_CMYC_UT-A
0.898
0.932
MYC
M07804_2.00
Homo sapiens
NSCACGTGKBN
NVMCACGTGSN
ChIP-seq
Gerstein et al.(2012)
NB4_CMYC_Stanford
0.898
0.932
MYC
M08729_2.00
Homo sapiens
VNVCACRTGGN
NCCAYGTGBNB
Misc
Kulakovskiy et al.(2013)
MYC_HUMAN.H11MO.0.A
0.898
0.932
MYC
M09457_2.00
Homo sapiens
CACGTGSN
NSCACGTG
Misc
Heinz et al.(2010)
LNCAP-cMyc_Unpublished
0.898
0.932
MYC
M09850_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_01
0.898
0.932
MYC
M09851_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_02
0.898
0.932
MYC
M09852_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_Q3
0.898
0.932
MYC
M09853_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYC_Q6_01
0.898
0.932
MYC
M09854_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYC_02
0.898
0.932
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000003006
bHLH
343
395
KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILALQ
ENSCPOP00000003006
bHLH
405
425
KDLLRKRREQLKHKLDQLRNS
Links
Other
bHLH
family TFs
Other
Cavia porcellus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_04873
Chaetomium globosum
CHGG_04873
I
CMQ_895
Grosmannia clavigera
CMQ_895
I
col-22
Neurospora crassa
NCU04390
D
CTHT_0030250
Chaetomium thermophilum
CTHT_0030250
I
estExt_fgenesh1_pg.C_30899
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30899
I
estExt_Genewise1.C_30584
Neurospora discreta
estExt_Genewise1.C_30584
I
F503_05042
Ophiostoma piceae uamh
F503_05042
I
GGTG_02924
Gaeumannomyces graminis
GGTG_02924
I
HMPREF1624_04110
Sporothrix schenckii
HMPREF1624_04110
I
MYCTH_2299337
Myceliophthora thermophila
MYCTH_2299337
I
NEUTE1DRAFT_60791
Neurospora tetrasperma
NEUTE1DRAFT_60791
I
PODANS_3_3810
Podospora anserina
PODANS_3_3810
I
SMAC_01754
Sordaria macrospora
SMAC_01754
I
SPBR_05511
Sporothrix brasiliensis
SPBR_05511
I
TRIATDRAFT_266867
Trichoderma atroviride
TRIATDRAFT_266867
I
UCRPA7_6855
Togninia minima
UCRPA7_6855
I
VHEMI03392
Torrubiella hemipterigena
VHEMI03392
I