CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSFALG00000003827
(
Ficedula albicollis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSFALG00000003827
T034103_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN
NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.914
1.000
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH
DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.914
1.000
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM
KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.914
1.000
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH
DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000004010
bHLH
10
59
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKH
Links
Other
bHLH
family TFs
Other
Ficedula albicollis
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001060801
Anisakis simplex
ASIM_0001060801
I
ASU_13270
Ascaris suum
ASU_13270
I
BTMF_0000441401
Brugia timori
BTMF_0000441401
I
Cflo_08860--NP_001011634.1_APIME
Camponotus floridanus
Cflo_08860--NP_001011634.1_APIME
I
EEL_0000992201
Elaeophora elaphi
EEL_0000992201
I
ENSCSAVG00000007831
Ciona savignyi
ENSCSAVG00000007831
I
L596_g17227
Steinernema carpocapsae
L596_g17227
I
OFLC_0001404101
Onchocerca flexuosa
OFLC_0001404101
I
PPAI005408
Phlebotomus papatasi
PPAI005408
I
Pvit_17874
Pogona vitticeps
Pvit_17874
I
TRE_0001027401
Trichobilharzia regenti
TRE_0001027401
I
TriadG49897
Trichoplax adhaerens
TriadG49897
I