CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCF3
(
Felis catus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSFCAG00000023514
T034219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN
NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.884
0.981
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB
VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.884
0.981
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB
VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.884
0.981
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB
VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.884
0.865
TCF12
M04137_2.00
Homo sapiens
VCACSTGB
VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.884
0.865
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.884
0.865
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.884
0.865
TCF12
M07806_2.00
Homo sapiens
VCASCTGB
VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.884
0.865
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH
DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.884
0.865
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH
DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.884
0.865
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB
VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.884
0.865
TCF12
M09858_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.884
0.865
TCF12
M09859_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.884
0.865
TCF12
M09860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.884
0.865
TCF12
M09861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.884
0.865
TCF12
M09862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.884
0.865
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN
NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.884
0.865
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN
NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.882
0.865
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN
NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.882
0.865
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN
NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.882
0.865
TCF4
M02728_2.00
Homo sapiens
RCACCTG
CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.882
0.865
TCF4
M04214_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.882
0.865
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB
VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.882
0.865
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.882
0.865
TCF4
M04215_2.00
Homo sapiens
VCACCTGN
NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.882
0.865
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.856
0.827
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.856
0.827
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS
SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.856
0.827
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN
NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.856
0.827
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.856
0.827
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.856
0.827
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.856
0.827
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.856
0.827
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.856
0.827
Tcf3
M09886_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.856
0.827
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000024374
bHLH
552
605
RRMANNARERVRVRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLE
Links
Other
bHLH
family TFs
Other
Felis catus
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL010031
Aedes aegypti
AAEL010031
I
0.000
AALB007560
Anopheles albimanus
AALB007560
I
0.000
AALB007822
Anopheles albimanus
AALB007822
I
0.000
Aan_R009769
Calypte anna
Aan_R009769
I
0.000
AARA007787
Anopheles arabiensis
AARA007787
I
0.000
AATE012411
Anopheles atroparvus
AATE012411
I
0.000
ACEP13483
Atta cephalotes
ACEP13483
I
0.000
ACHR000018
Anopheles christyi
ACHR000018
I
0.000
ACOM025280
Anopheles coluzzii
ACOM025280
I
0.000
ACUA017871
Anopheles culicifacies
ACUA017871
I
0.000
ACYPI002601
Acyrthosiphon pisum
ACYPI002601
I
0.000
ADIR008037
Anopheles dirus
ADIR008037
I
0.000
AEPI000467
Anopheles epiroticus
AEPI000467
I
0.000
Afo_R014913
Aptenodytes forsteri
Afo_R014913
I
0.000
AFUN008043
Anopheles funestus
AFUN008043
I
0.000
AGAP007124
Anopheles gambiae
AGAP007124
I
0.000
Alligator_sinensis_CCG001917.1
Alligator sinensis
Alligator_sinensis_CCG001917.1
I
0.000
AMAM016192
Anopheles maculatus
AMAM016192
I
0.000
AMEC000644
Anopheles melas
AMEC000644
I
0.000
AMEM011707
Anopheles merus
AMEM011707
I
0.000
AMIN011264
Anopheles minimus
AMIN011264
I
0.000
AQUA002051
Anopheles quadriannulatus
AQUA002051
I
0.000
ASTEI06898
Anopheles stephensi
ASTEI06898
I
0.000
A_02746
Schistosoma haematobium
A_02746
I
0.000
BGIBMGA012033
Bombyx mori
BGIBMGA012033
I
0.000
BGLB011346
Biomphalaria glabrata
BGLB011346
I
0.000
Brh_R005605
Buceros rhinoceros
Brh_R005605
I
0.000
CapteG80741
Capitella teleta
CapteG80741
I
0.000
Cflo_04912--XP_001121050.1_APIME
Camponotus floridanus
Cflo_04912--XP_001121050.1_APIME
I
0.000
CGI_10026944
Crassostrea gigas
CGI_10026944
I
0.000
CLEC012607
Cimex lectularius
CLEC012607
I
0.000
CPIJ016930
Culex quinquefasciatus
CPIJ016930
I
0.000
CpipJ_CPIJ016930
Culex pipiens
CpipJ_CPIJ016930
I
0.000
csin111822
Clonorchis sinensis
csin111822
I
0.000
D915_08809
Fasciola hepatica
D915_08809
I
0.000
DAPPUDRAFT_37461
Daphnia pulex
DAPPUDRAFT_37461
I
0.000
ECANG7_04949
Echinococcus canadensis
ECANG7_04949
I
0.000
EmuJ_000624300
Echinococcus multilocularis
EmuJ_000624300
I
0.000
ENSAMEG00000005942
Ailuropoda melanoleuca
ENSAMEG00000005942
I
0.000
ENSAMEG00000015953
Ailuropoda melanoleuca
ENSAMEG00000015953
I
0.000
ENSAMXG00000000487
Astyanax mexicanus
ENSAMXG00000000487
I
0.000
ENSAMXG00000004351
Astyanax mexicanus
ENSAMXG00000004351
I
0.000
ENSAPLG00000008024
Anas platyrhynchos
ENSAPLG00000008024
I
0.000
ENSBTAP00000044112-D1
Bos grunniens
ENSBTAP00000044112-D1
I
0.000
ENSBTAP00000052463-D1
Bos grunniens
ENSBTAP00000052463-D1
I
0.000
ENSCPOG00000004726
Cavia porcellus
ENSCPOG00000004726
I
0.000
ENSCSAG00000013709
Chlorocebus sabaeus
ENSCSAG00000013709
I
0.000
ENSCSAG00000016705
Chlorocebus sabaeus
ENSCSAG00000016705
I
0.000
ENSFALG00000008455
Ficedula albicollis
ENSFALG00000008455
I
0.000
ENSFALG00000011861
Ficedula albicollis
ENSFALG00000011861
I
0.000
ENSGALG00000019470
Gallus gallus
ENSGALG00000019470
I
0.000
ENSGMOG00000019481
Gadus morhua
ENSGMOG00000019481
I
0.000
ENSLACG00000005024
Latimeria chalumnae
ENSLACG00000005024
I
0.000
ENSLACG00000014348
Latimeria chalumnae
ENSLACG00000014348
I
0.000
ENSLOCG00000003912
Lepisosteus oculatus
ENSLOCG00000003912
I
0.000
ENSLOCG00000016232
Lepisosteus oculatus
ENSLOCG00000016232
I
0.000
ENSMEUG00000005491
Macropus eugenii
ENSMEUG00000005491
I
0.000
ENSMICG00000014144
Microcebus murinus
ENSMICG00000014144
I
0.000
ENSMPUG00000010593
Mustela putorius furo
ENSMPUG00000010593
I
0.000
ENSMPUG00000014798
Mustela putorius furo
ENSMPUG00000014798
I
0.000
ENSNLEG00000011452
Nomascus leucogenys
ENSNLEG00000011452
I
0.000
ENSNLEG00000014647
Nomascus leucogenys
ENSNLEG00000014647
I
0.000
ENSOARG00000004844
Ovis aries
ENSOARG00000004844
I
0.000
ENSOARG00000014623
Ovis aries
ENSOARG00000014623
I
0.000
ENSONIG00000000446
Oreochromis niloticus
ENSONIG00000000446
I
0.000
ENSONIG00000014278
Oreochromis niloticus
ENSONIG00000014278
I
0.000
ENSP00000321445
Macaca fascicularis
ENSP00000321445
I
0.000
ENSP00000356857
Macaca fascicularis
ENSP00000356857
I
0.000
ENSPANG00000022301
Papio anubis
ENSPANG00000022301
I
0.000
ENSPANG00000024238
Papio anubis
ENSPANG00000024238
I
0.000
ENSPCAG00000006459
Procavia capensis
ENSPCAG00000006459
I
0.000
ENSPFOG00000010821
Poecilia formosa
ENSPFOG00000010821
I
0.000
ENSPFOG00000020725
Poecilia formosa
ENSPFOG00000020725
I
0.000
ENSPMAG00000000379
Petromyzon marinus
ENSPMAG00000000379
I
0.000
ENSPPYG00000017022
Pongo abelii
ENSPPYG00000017022
I
0.000
ENSPPYG00000018665
Pongo abelii
ENSPPYG00000018665
I
0.000
ENSPSIG00000003604
Pelodiscus sinensis
ENSPSIG00000003604
I
0.000
ENSSHAG00000002801
Sarcophilus harrisii
ENSSHAG00000002801
I
0.000
ENSSHAG00000004870
Sarcophilus harrisii
ENSSHAG00000004870
I
0.000
ENSSSCG00000004174
Sus scrofa
ENSSSCG00000004174
I
0.000
ENSSTOG00000023733
Ictidomys tridecemlineatus
ENSSTOG00000023733
I
0.000
ENSSTOG00000024832
Ictidomys tridecemlineatus
ENSSTOG00000024832
I
0.000
ENSXMAG00000004322
Xiphophorus maculatus
ENSXMAG00000004322
I
0.000
ENSXMAG00000010332
Xiphophorus maculatus
ENSXMAG00000010332
I
0.000
fgenesh2_pg.scaffold_201000026
Branchiostoma floridae
fgenesh2_pg.scaffold_201000026
I
0.000
fgenesh2_pg.scaffold_201000027
Branchiostoma floridae
fgenesh2_pg.scaffold_201000027
I
0.000
fgenesh2_pg.scaffold_201000028
Branchiostoma floridae
fgenesh2_pg.scaffold_201000028
I
0.000
fgenesh2_pg.scaffold_201000029
Branchiostoma floridae
fgenesh2_pg.scaffold_201000029
I
0.000
GB42177
Apis mellifera
GB42177
I
0.000
Gfo_R006439
Geospiza fortis
Gfo_R006439
I
0.000
gw.912.11.1
Branchiostoma floridae
gw.912.11.1
I
0.000
HelroG188977
Helobdella robusta
HelroG188977
I
0.000
HHAL000695-PA
Halyomorpha halys
HHAL000695-PA
I
0.000
Hsal_01862--XP_001122645.1_APIME
Harpegnathos saltator
Hsal_01862--XP_001122645.1_APIME
I
0.000
ISCW019706
Ixodes scapularis
ISCW019706
I
0.000
KGM_20305
Danaus plexippus
KGM_20305
I
0.000
L798_06836
Zootermopsis nevadensis
L798_06836
I
0.000
LDEC005027
Leptinotarsa decemlineata
LDEC005027
I
0.000
LLOJ001927
Lutzomyia longipalpis
LLOJ001927
I
0.000
LotgiG99224
Lottia gigantea
LotgiG99224
I
0.000
MCOS_0000023201
Mesocestoides corti
MCOS_0000023201
I
0.000
MSC
Anolis carolinensis
ENSACAG00000014585
I
0.000
MSC
Bos taurus
ENSBTAG00000005404
I
0.000
MSC
Canis familiaris
ENSCAFG00000007923
I
0.000
MSC
Callithrix jacchus
ENSCJAG00000007766
I
0.000
msc
Danio rerio
ENSDARG00000045353
I
0.000
MSC
Dasypus novemcinctus
ENSDNOG00000019019
I
0.000
MSC
Equus caballus
ENSECAG00000008333
I
0.000
MSC
Erinaceus europaeus
ENSEEUG00000005021
I
0.000
MSC
Homo sapiens
ENSG00000178860
D
0.000
msc
Gasterosteus aculeatus
ENSGACG00000002802
I
0.000
MSC
Gorilla gorilla
ENSGGOG00000009955
I
0.000
MSC
Loxodonta africana
ENSLAFG00000002649
I
0.000
MSC
Myotis lucifugus
ENSMLUG00000008572
I
0.000
MSC
Macaca mulatta
ENSMMUG00000000947
I
0.000
MSC
Monodelphis domestica
ENSMODG00000007225
I
0.000
Msc
Mus musculus
ENSMUSG00000025930
D
0.000
MSC
Oryctolagus cuniculus
ENSOCUG00000007208
I
0.000
MSC
Otolemur garnettii
ENSOGAG00000013827
I
0.000
msc
Oryzias latipes
ENSORLG00000008030
I
0.000
MSC
Procavia capensis
ENSPCAG00000004330
I
0.000
MSC
Pan troglodytes
ENSPTRG00000020339
I
0.000
MSC
Pteropus vampyrus
ENSPVAG00000009083
I
0.000
Msc
Rattus norvegicus
ENSRNOG00000007540
I
0.000
MSC
Sus scrofa
ENSSSCG00000006187
I
0.000
MSC
Tupaia belangeri
ENSTBEG00000014659
I
0.000
MSC
Taeniopygia guttata
ENSTGUG00000011502
I
0.000
msc
Tetraodon nigroviridis
ENSTNIG00000008188
I
0.000
msc
Takifugu rubripes
ENSTRUG00000012425
I
0.000
MSC
Tursiops truncatus
ENSTTRG00000017260
I
0.000
MSC
Vicugna pacos
ENSVPAG00000000378
I
0.000
msc
Xenopus tropicalis
XB-GENE-978233
I
0.000
Myotis_brandtii_TCF21_10035690
Myotis brandtii
Myotis_brandtii_TCF21_10035690
I
0.000
Ogr02938
Ophisaurus gracilis
Ogr02938
I
0.000
PHUM294350
Pediculus humanus
PHUM294350
I
0.000
PPAI008462
Phlebotomus papatasi
PPAI008462
I
0.000
RPRC001590
Rhodnius prolixus
RPRC001590
I
0.000
Sakowv30031408m.g
Saccoglossus kowalevskii
Sakowv30031408m.g
I
0.000
SCUD_0001558401
Schistosoma curassoni
SCUD_0001558401
I
0.000
SINV12414
Solenopsis invicta
SINV12414
I
0.000
Sjc_0073180
Schistosoma japonicum
Sjc_0073180
I
0.000
SMAR006929
Strigamia maritima
SMAR006929
I
0.000
Smp_022610
Schistosoma mansoni
Smp_022610
I
0.000
SMRZ_0001749101
Schistosoma margrebowiei
SMRZ_0001749101
I
0.000
SMTD_0000660301
Schistosoma mattheei
SMTD_0000660301
I
0.000
SPU_012008
Strongylocentrotus purpuratus
SPU_012008
I
0.000
T265_00953
Opisthorchis viverrini
T265_00953
I
0.000
TASK_0000025401
Taenia asiatica
TASK_0000025401
I
0.000
TC002349
Tribolium castaneum
TC002349
I
0.000
TCF21
Anolis carolinensis
ENSACAG00000010325
I
0.000
TCF21
Bos taurus
ENSBTAG00000021827
I
0.000
TCF21
Canis familiaris
ENSCAFG00000000205
I
0.000
TCF21
Callithrix jacchus
ENSCJAG00000002811
I
0.000
TCF21
Cavia porcellus
ENSCPOG00000024201
I
0.000
tcf21
Danio rerio
ENSDARG00000036869
I
0.000
TCF21
Dasypus novemcinctus
ENSDNOG00000042846
I
0.000
TCF21
Equus caballus
ENSECAG00000019197
I
0.000
TCF21
Echinops telfairi
ENSETEG00000012492
I
0.000
TCF21
Felis catus
ENSFCAG00000031261
I
0.000
TCF21
Homo sapiens
ENSG00000118526
D
0.000
tcf21
Gasterosteus aculeatus
ENSGACG00000010957
I
0.000
TCF21
Gallus gallus
ENSGALG00000029024
I
0.000
TCF21
Gorilla gorilla
ENSGGOG00000005460
I
0.000
TCF21
Loxodonta africana
ENSLAFG00000009507
I
0.000
TCF21
Meleagris gallopavo
ENSMGAG00000013117
I
0.000
TCF21
Macaca mulatta
ENSMMUG00000002871
I
0.000
TCF21
Monodelphis domestica
ENSMODG00000017516
I
0.000
Tcf21
Mus musculus
ENSMUSG00000045680
D
0.000
TCF21
Ornithorhynchus anatinus
ENSOANG00000013098
I
0.000
TCF21
Oryctolagus cuniculus
ENSOCUG00000017761
I
0.000
TCF21
Otolemur garnettii
ENSOGAG00000034073
I
0.000
tcf21
Oryzias latipes
ENSORLG00000016491
I
0.000
TCF21
Pan troglodytes
ENSPTRG00000018622
I
0.000
TCF21
Pteropus vampyrus
ENSPVAG00000009085
I
0.000
Tcf21
Rattus norvegicus
ENSRNOG00000016700
I
0.000
TCF21
Taeniopygia guttata
ENSTGUG00000011548
I
0.000
tcf21
Tetraodon nigroviridis
ENSTNIG00000016326
I
0.000
tcf21
Takifugu rubripes
ENSTRUG00000003919
I
0.000
TCF21
Tursiops truncatus
ENSTTRG00000009645
I
0.000
TCF21
Vicugna pacos
ENSVPAG00000006271
I
0.000
tcf21
Xenopus tropicalis
XB-GENE-484805
I
0.000
tcf21.L
Xenopus laevis
XB-GENE-484809
I
0.000
TRE_0000636201
Trichobilharzia regenti
TRE_0000636201
I
0.000
TsM_000945000
Taenia solium
TsM_000945000
I
0.000